Protein–RNA interactions for Protein: O00592

PODXL, Podocalyxin, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PODXLO00592 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.3■□□□□ 0.84
PODXLO00592 NEK4P2-201ENST00000580004 1012 ntBASIC20.3■□□□□ 0.84
PODXLO00592 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PODXLO00592 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PODXLO00592 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.3■□□□□ 0.84
PODXLO00592 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PODXLO00592 MED25-212ENST00000618715 1467 ntTSL 5 BASIC20.3■□□□□ 0.84
PODXLO00592 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PODXLO00592 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
PODXLO00592 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
PODXLO00592 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PODXLO00592 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PODXLO00592 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PODXLO00592 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.29■□□□□ 0.84
PODXLO00592 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PODXLO00592 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PODXLO00592 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
PODXLO00592 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PODXLO00592 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PODXLO00592 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.29■□□□□ 0.84
PODXLO00592 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PODXLO00592 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC20.29■□□□□ 0.84
PODXLO00592 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PODXLO00592 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PODXLO00592 SAPCD2P2-201ENST00000431719 1174 ntBASIC20.29■□□□□ 0.84
PODXLO00592 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.29■□□□□ 0.84
PODXLO00592 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PODXLO00592 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC20.29■□□□□ 0.84
PODXLO00592 ETFA-216ENST00000560726 942 ntTSL 3 BASIC20.29■□□□□ 0.84
PODXLO00592 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.29■□□□□ 0.84
PODXLO00592 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC20.29■□□□□ 0.84
PODXLO00592 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.29■□□□□ 0.84
PODXLO00592 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PODXLO00592 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.29■□□□□ 0.84
PODXLO00592 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
PODXLO00592 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.29■□□□□ 0.84
PODXLO00592 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.29■□□□□ 0.84
PODXLO00592 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
PODXLO00592 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PODXLO00592 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PODXLO00592 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.28■□□□□ 0.84
PODXLO00592 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PODXLO00592 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.28■□□□□ 0.84
PODXLO00592 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PODXLO00592 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PODXLO00592 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PODXLO00592 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PODXLO00592 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PODXLO00592 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PODXLO00592 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.28■□□□□ 0.84
PODXLO00592 HOMER2P1-201ENST00000455653 964 ntBASIC20.28■□□□□ 0.84
PODXLO00592 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC20.28■□□□□ 0.84
PODXLO00592 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PODXLO00592 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20.28■□□□□ 0.84
PODXLO00592 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC20.28■□□□□ 0.84
PODXLO00592 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
PODXLO00592 MYC-208ENST00000641036 567 ntBASIC20.28■□□□□ 0.84
PODXLO00592 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
PODXLO00592 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20.28■□□□□ 0.84
PODXLO00592 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.28■□□□□ 0.84
PODXLO00592 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PODXLO00592 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.28■□□□□ 0.84
PODXLO00592 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PODXLO00592 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.27■□□□□ 0.84
PODXLO00592 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.27■□□□□ 0.84
PODXLO00592 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PODXLO00592 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PODXLO00592 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PODXLO00592 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PODXLO00592 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PODXLO00592 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PODXLO00592 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC20.27■□□□□ 0.84
PODXLO00592 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
PODXLO00592 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PODXLO00592 MCCD1P1-208ENST00000445732 328 ntBASIC20.27■□□□□ 0.84
PODXLO00592 AL359075.1-203ENST00000462729 1002 ntBASIC20.27■□□□□ 0.84
PODXLO00592 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC20.27■□□□□ 0.84
PODXLO00592 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
PODXLO00592 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PODXLO00592 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PODXLO00592 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PODXLO00592 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PODXLO00592 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.27■□□□□ 0.84
PODXLO00592 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PODXLO00592 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
PODXLO00592 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
PODXLO00592 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
PODXLO00592 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.26■□□□□ 0.83
PODXLO00592 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
PODXLO00592 AC036111.1-201ENST00000533973 1582 ntBASIC20.26■□□□□ 0.83
PODXLO00592 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
PODXLO00592 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PODXLO00592 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
PODXLO00592 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PODXLO00592 IRX1P1-201ENST00000438849 1838 ntBASIC20.26■□□□□ 0.83
PODXLO00592 AC141586.3-201ENST00000562166 1838 ntBASIC20.26■□□□□ 0.83
PODXLO00592 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
PODXLO00592 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC20.26■□□□□ 0.83
PODXLO00592 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC20.26■□□□□ 0.83
PODXLO00592 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms