Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDC7O00311 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CDC7O00311 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.36■□□□□ 0.53
CDC7O00311 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CDC7O00311 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.35■□□□□ 0.53
CDC7O00311 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDC7O00311 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDC7O00311 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDC7O00311 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.35■□□□□ 0.53
CDC7O00311 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
CDC7O00311 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDC7O00311 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
CDC7O00311 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDC7O00311 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDC7O00311 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDC7O00311 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.35■□□□□ 0.53
CDC7O00311 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.35■□□□□ 0.53
CDC7O00311 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.35■□□□□ 0.53
CDC7O00311 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDC7O00311 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.35■□□□□ 0.53
CDC7O00311 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.35■□□□□ 0.53
CDC7O00311 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.35■□□□□ 0.53
CDC7O00311 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.35■□□□□ 0.53
CDC7O00311 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.35■□□□□ 0.53
CDC7O00311 TMEM191A-211ENST00000637163 1067 ntBASIC18.35■□□□□ 0.53
CDC7O00311 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDC7O00311 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDC7O00311 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDC7O00311 AC008556.1-201ENST00000610908 2040 ntBASIC18.35■□□□□ 0.53
CDC7O00311 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.35■□□□□ 0.53
CDC7O00311 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDC7O00311 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDC7O00311 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDC7O00311 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CDC7O00311 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CDC7O00311 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDC7O00311 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDC7O00311 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDC7O00311 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDC7O00311 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDC7O00311 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.34■□□□□ 0.53
CDC7O00311 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.53
CDC7O00311 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDC7O00311 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.34■□□□□ 0.53
CDC7O00311 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CDC7O00311 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDC7O00311 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDC7O00311 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.34■□□□□ 0.53
CDC7O00311 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.34■□□□□ 0.53
CDC7O00311 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.34■□□□□ 0.53
CDC7O00311 CRYGFP-201ENST00000418459 633 ntBASIC18.34■□□□□ 0.53
CDC7O00311 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.34■□□□□ 0.53
CDC7O00311 AC008550.1-201ENST00000511500 884 ntBASIC18.34■□□□□ 0.53
CDC7O00311 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.34■□□□□ 0.53
CDC7O00311 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.34■□□□□ 0.53
CDC7O00311 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDC7O00311 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.34■□□□□ 0.53
CDC7O00311 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.34■□□□□ 0.53
CDC7O00311 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.34■□□□□ 0.53
CDC7O00311 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDC7O00311 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CDC7O00311 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDC7O00311 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDC7O00311 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDC7O00311 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.53
CDC7O00311 AL390961.4-201ENST00000623958 2535 ntBASIC18.33■□□□□ 0.53
CDC7O00311 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDC7O00311 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.33■□□□□ 0.53
CDC7O00311 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDC7O00311 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.33■□□□□ 0.53
CDC7O00311 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.33■□□□□ 0.53
CDC7O00311 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CDC7O00311 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
CDC7O00311 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDC7O00311 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CDC7O00311 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CDC7O00311 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.33■□□□□ 0.52
CDC7O00311 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.33■□□□□ 0.52
CDC7O00311 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CDC7O00311 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.33■□□□□ 0.52
CDC7O00311 AP003071.4-201ENST00000562276 1284 ntBASIC18.33■□□□□ 0.52
CDC7O00311 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.33■□□□□ 0.52
CDC7O00311 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.33■□□□□ 0.52
CDC7O00311 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.33■□□□□ 0.52
CDC7O00311 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.33■□□□□ 0.52
CDC7O00311 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.33■□□□□ 0.52
CDC7O00311 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
CDC7O00311 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CDC7O00311 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDC7O00311 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.33■□□□□ 0.52
CDC7O00311 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CDC7O00311 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDC7O00311 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.33■□□□□ 0.52
CDC7O00311 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDC7O00311 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDC7O00311 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDC7O00311 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDC7O00311 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDC7O00311 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.32■□□□□ 0.52
CDC7O00311 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms