Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NPIPB4C9JG80 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
NPIPB4C9JG80 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NPIPB4C9JG80 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NPIPB4C9JG80 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.55■□□□□ 0.24
NPIPB4C9JG80 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC16.55■□□□□ 0.24
NPIPB4C9JG80 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.55■□□□□ 0.24
NPIPB4C9JG80 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NPIPB4C9JG80 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NPIPB4C9JG80 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
NPIPB4C9JG80 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
NPIPB4C9JG80 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NPIPB4C9JG80 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
NPIPB4C9JG80 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NPIPB4C9JG80 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NPIPB4C9JG80 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NPIPB4C9JG80 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
NPIPB4C9JG80 NEFHP1-201ENST00000412845 2629 ntBASIC16.54■□□□□ 0.24
NPIPB4C9JG80 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NPIPB4C9JG80 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NPIPB4C9JG80 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NPIPB4C9JG80 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
NPIPB4C9JG80 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NPIPB4C9JG80 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NPIPB4C9JG80 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
NPIPB4C9JG80 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
NPIPB4C9JG80 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NPIPB4C9JG80 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.54■□□□□ 0.24
NPIPB4C9JG80 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.54■□□□□ 0.24
NPIPB4C9JG80 SNORA78-201ENST00000459373 127 ntBASIC16.54■□□□□ 0.24
NPIPB4C9JG80 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NPIPB4C9JG80 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NPIPB4C9JG80 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.54■□□□□ 0.24
NPIPB4C9JG80 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.54■□□□□ 0.24
NPIPB4C9JG80 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NPIPB4C9JG80 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.54■□□□□ 0.24
NPIPB4C9JG80 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NPIPB4C9JG80 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NPIPB4C9JG80 AC036111.1-201ENST00000533973 1582 ntBASIC16.54■□□□□ 0.24
NPIPB4C9JG80 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC16.54■□□□□ 0.24
NPIPB4C9JG80 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
NPIPB4C9JG80 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NPIPB4C9JG80 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.54■□□□□ 0.24
NPIPB4C9JG80 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
NPIPB4C9JG80 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.53■□□□□ 0.24
NPIPB4C9JG80 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.53■□□□□ 0.24
NPIPB4C9JG80 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.53■□□□□ 0.24
NPIPB4C9JG80 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NPIPB4C9JG80 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
NPIPB4C9JG80 ABALON-201ENST00000629058 1903 ntBASIC16.53■□□□□ 0.24
NPIPB4C9JG80 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.53■□□□□ 0.24
NPIPB4C9JG80 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NPIPB4C9JG80 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
NPIPB4C9JG80 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.53■□□□□ 0.24
NPIPB4C9JG80 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NPIPB4C9JG80 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
NPIPB4C9JG80 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NPIPB4C9JG80 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
NPIPB4C9JG80 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.53■□□□□ 0.24
NPIPB4C9JG80 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC16.53■□□□□ 0.24
NPIPB4C9JG80 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.53■□□□□ 0.24
NPIPB4C9JG80 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.53■□□□□ 0.24
NPIPB4C9JG80 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NPIPB4C9JG80 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NPIPB4C9JG80 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.53■□□□□ 0.24
NPIPB4C9JG80 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
NPIPB4C9JG80 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.53■□□□□ 0.24
NPIPB4C9JG80 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NPIPB4C9JG80 AL390961.4-201ENST00000623958 2535 ntBASIC16.53■□□□□ 0.24
NPIPB4C9JG80 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NPIPB4C9JG80 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC16.53■□□□□ 0.24
NPIPB4C9JG80 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
NPIPB4C9JG80 RNF165-205ENST00000588679 2904 ntBASIC16.52■□□□□ 0.24
NPIPB4C9JG80 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NPIPB4C9JG80 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NPIPB4C9JG80 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.52■□□□□ 0.24
NPIPB4C9JG80 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NPIPB4C9JG80 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NPIPB4C9JG80 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NPIPB4C9JG80 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
NPIPB4C9JG80 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NPIPB4C9JG80 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
NPIPB4C9JG80 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NPIPB4C9JG80 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.52■□□□□ 0.24
NPIPB4C9JG80 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NPIPB4C9JG80 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.52■□□□□ 0.24
NPIPB4C9JG80 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
NPIPB4C9JG80 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
NPIPB4C9JG80 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
NPIPB4C9JG80 EGLN1P1-201ENST00000531623 762 ntBASIC16.52■□□□□ 0.24
NPIPB4C9JG80 AL355075.4-201ENST00000554988 638 ntBASIC16.52■□□□□ 0.24
NPIPB4C9JG80 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.52■□□□□ 0.24
NPIPB4C9JG80 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
NPIPB4C9JG80 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
NPIPB4C9JG80 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NPIPB4C9JG80 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
NPIPB4C9JG80 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
NPIPB4C9JG80 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NPIPB4C9JG80 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.52■□□□□ 0.23
NPIPB4C9JG80 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms