Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC13.29□□□□□ -0.28
LINC01549A6NIU2 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC13.29□□□□□ -0.28
LINC01549A6NIU2 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
LINC01549A6NIU2 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC01549A6NIU2 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC01549A6NIU2 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC01549A6NIU2 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC01549A6NIU2 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LINC01549A6NIU2 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC01549A6NIU2 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC13.29□□□□□ -0.28
LINC01549A6NIU2 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC13.29□□□□□ -0.28
LINC01549A6NIU2 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC13.29□□□□□ -0.28
LINC01549A6NIU2 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC01549A6NIU2 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC01549A6NIU2 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC01549A6NIU2 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
LINC01549A6NIU2 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LINC01549A6NIU2 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
LINC01549A6NIU2 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC01549A6NIU2 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LINC01549A6NIU2 AC008894.3-201ENST00000624324 3103 ntBASIC13.29□□□□□ -0.28
LINC01549A6NIU2 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
LINC01549A6NIU2 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC01549A6NIU2 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LINC01549A6NIU2 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC01549A6NIU2 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
LINC01549A6NIU2 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC01549A6NIU2 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC01549A6NIU2 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
LINC01549A6NIU2 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC13.29□□□□□ -0.28
LINC01549A6NIU2 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC13.29□□□□□ -0.28
LINC01549A6NIU2 AC112777.1-201ENST00000540175 1423 ntBASIC13.29□□□□□ -0.28
LINC01549A6NIU2 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC01549A6NIU2 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LINC01549A6NIU2 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LINC01549A6NIU2 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC01549A6NIU2 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC13.28□□□□□ -0.28
LINC01549A6NIU2 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
LINC01549A6NIU2 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LINC01549A6NIU2 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LINC01549A6NIU2 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC01549A6NIU2 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC13.28□□□□□ -0.28
LINC01549A6NIU2 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC13.28□□□□□ -0.28
LINC01549A6NIU2 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LINC01549A6NIU2 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
LINC01549A6NIU2 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC13.28□□□□□ -0.28
LINC01549A6NIU2 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC01549A6NIU2 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
LINC01549A6NIU2 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC01549A6NIU2 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC13.28□□□□□ -0.28
LINC01549A6NIU2 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
LINC01549A6NIU2 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC01549A6NIU2 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC01549A6NIU2 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
LINC01549A6NIU2 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LINC01549A6NIU2 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LINC01549A6NIU2 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
LINC01549A6NIU2 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC01549A6NIU2 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LINC01549A6NIU2 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC01549A6NIU2 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LINC01549A6NIU2 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC13.28□□□□□ -0.28
LINC01549A6NIU2 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
LINC01549A6NIU2 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
LINC01549A6NIU2 AC096631.2-201ENST00000436136 790 ntBASIC13.28□□□□□ -0.28
LINC01549A6NIU2 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LINC01549A6NIU2 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC13.28□□□□□ -0.28
LINC01549A6NIU2 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LINC01549A6NIU2 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC13.28□□□□□ -0.28
LINC01549A6NIU2 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC13.28□□□□□ -0.28
LINC01549A6NIU2 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC01549A6NIU2 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC13.28□□□□□ -0.28
LINC01549A6NIU2 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC13.28□□□□□ -0.28
LINC01549A6NIU2 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
LINC01549A6NIU2 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
LINC01549A6NIU2 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC13.28□□□□□ -0.28
LINC01549A6NIU2 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC13.28□□□□□ -0.28
LINC01549A6NIU2 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC13.28□□□□□ -0.28
LINC01549A6NIU2 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LINC01549A6NIU2 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC01549A6NIU2 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC01549A6NIU2 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC01549A6NIU2 GNE-204ENST00000539208 2190 ntTSL 2 BASIC13.28□□□□□ -0.28
LINC01549A6NIU2 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC13.28□□□□□ -0.28
LINC01549A6NIU2 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
LINC01549A6NIU2 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC01549A6NIU2 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC01549A6NIU2 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
LINC01549A6NIU2 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
LINC01549A6NIU2 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
LINC01549A6NIU2 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
LINC01549A6NIU2 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
LINC01549A6NIU2 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
LINC01549A6NIU2 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
LINC01549A6NIU2 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LINC01549A6NIU2 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LINC01549A6NIU2 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
LINC01549A6NIU2 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
LINC01549A6NIU2 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
LINC01549A6NIU2 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms