Protein–RNA interactions for Protein: A6NGN4

PRAMEF25, PRAME family member 25, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF25A6NGN4 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.55■□□□□ 0.4
PRAMEF25A6NGN4 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PRAMEF25A6NGN4 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PRAMEF25A6NGN4 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRAMEF25A6NGN4 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
PRAMEF25A6NGN4 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.54■□□□□ 0.4
PRAMEF25A6NGN4 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PRAMEF25A6NGN4 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.54■□□□□ 0.4
PRAMEF25A6NGN4 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRAMEF25A6NGN4 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRAMEF25A6NGN4 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.54■□□□□ 0.4
PRAMEF25A6NGN4 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRAMEF25A6NGN4 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRAMEF25A6NGN4 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
PRAMEF25A6NGN4 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRAMEF25A6NGN4 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
PRAMEF25A6NGN4 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.54■□□□□ 0.4
PRAMEF25A6NGN4 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.54■□□□□ 0.4
PRAMEF25A6NGN4 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.54■□□□□ 0.4
PRAMEF25A6NGN4 AC097488.1-201ENST00000507834 756 ntBASIC17.54■□□□□ 0.4
PRAMEF25A6NGN4 BX088651.1-201ENST00000540551 451 ntBASIC17.54■□□□□ 0.4
PRAMEF25A6NGN4 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.54■□□□□ 0.4
PRAMEF25A6NGN4 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.54■□□□□ 0.4
PRAMEF25A6NGN4 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.54■□□□□ 0.4
PRAMEF25A6NGN4 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRAMEF25A6NGN4 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRAMEF25A6NGN4 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRAMEF25A6NGN4 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRAMEF25A6NGN4 AC126763.1-201ENST00000552015 2118 ntBASIC17.54■□□□□ 0.4
PRAMEF25A6NGN4 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.54■□□□□ 0.4
PRAMEF25A6NGN4 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRAMEF25A6NGN4 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRAMEF25A6NGN4 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
PRAMEF25A6NGN4 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PRAMEF25A6NGN4 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRAMEF25A6NGN4 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRAMEF25A6NGN4 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRAMEF25A6NGN4 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRAMEF25A6NGN4 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRAMEF25A6NGN4 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PRAMEF25A6NGN4 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRAMEF25A6NGN4 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.53■□□□□ 0.4
PRAMEF25A6NGN4 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRAMEF25A6NGN4 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.53■□□□□ 0.4
PRAMEF25A6NGN4 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.53■□□□□ 0.4
PRAMEF25A6NGN4 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRAMEF25A6NGN4 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PRAMEF25A6NGN4 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRAMEF25A6NGN4 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRAMEF25A6NGN4 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRAMEF25A6NGN4 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRAMEF25A6NGN4 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRAMEF25A6NGN4 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PRAMEF25A6NGN4 MIR1238-201ENST00000408483 83 ntBASIC17.53■□□□□ 0.4
PRAMEF25A6NGN4 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PRAMEF25A6NGN4 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PRAMEF25A6NGN4 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.53■□□□□ 0.4
PRAMEF25A6NGN4 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PRAMEF25A6NGN4 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PRAMEF25A6NGN4 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRAMEF25A6NGN4 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
PRAMEF25A6NGN4 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.53■□□□□ 0.4
PRAMEF25A6NGN4 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
PRAMEF25A6NGN4 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PRAMEF25A6NGN4 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRAMEF25A6NGN4 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRAMEF25A6NGN4 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PRAMEF25A6NGN4 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRAMEF25A6NGN4 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRAMEF25A6NGN4 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.4
PRAMEF25A6NGN4 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.52■□□□□ 0.4
PRAMEF25A6NGN4 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
PRAMEF25A6NGN4 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRAMEF25A6NGN4 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRAMEF25A6NGN4 CRYGFP-201ENST00000418459 633 ntBASIC17.52■□□□□ 0.4
PRAMEF25A6NGN4 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.52■□□□□ 0.4
PRAMEF25A6NGN4 MFAP1P1-201ENST00000442257 1255 ntBASIC17.52■□□□□ 0.4
PRAMEF25A6NGN4 PRSS44-201ENST00000515154 1146 ntBASIC17.52■□□□□ 0.4
PRAMEF25A6NGN4 AP005242.2-201ENST00000580065 1175 ntBASIC17.52■□□□□ 0.4
PRAMEF25A6NGN4 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.52■□□□□ 0.4
PRAMEF25A6NGN4 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
PRAMEF25A6NGN4 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
PRAMEF25A6NGN4 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.52■□□□□ 0.4
PRAMEF25A6NGN4 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRAMEF25A6NGN4 KRT8P11-201ENST00000409686 1436 ntBASIC17.52■□□□□ 0.4
PRAMEF25A6NGN4 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.52■□□□□ 0.4
PRAMEF25A6NGN4 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PRAMEF25A6NGN4 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
PRAMEF25A6NGN4 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
PRAMEF25A6NGN4 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.52■□□□□ 0.39
PRAMEF25A6NGN4 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
PRAMEF25A6NGN4 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PRAMEF25A6NGN4 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
PRAMEF25A6NGN4 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.52■□□□□ 0.39
PRAMEF25A6NGN4 AC096733.2-201ENST00000609937 1394 ntBASIC17.52■□□□□ 0.39
PRAMEF25A6NGN4 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.51■□□□□ 0.39
PRAMEF25A6NGN4 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRAMEF25A6NGN4 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRAMEF25A6NGN4 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.51■□□□□ 0.39
PRAMEF25A6NGN4 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms