Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
TBC1D3BA6NDS4 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TBC1D3BA6NDS4 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TBC1D3BA6NDS4 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TBC1D3BA6NDS4 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
TBC1D3BA6NDS4 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TBC1D3BA6NDS4 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.98■□□□□ 0.63
TBC1D3BA6NDS4 AC093525.10-201ENST00000625130 1569 ntBASIC18.98■□□□□ 0.63
TBC1D3BA6NDS4 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.97■□□□□ 0.63
TBC1D3BA6NDS4 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TBC1D3BA6NDS4 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TBC1D3BA6NDS4 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TBC1D3BA6NDS4 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TBC1D3BA6NDS4 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
TBC1D3BA6NDS4 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
TBC1D3BA6NDS4 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
TBC1D3BA6NDS4 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TBC1D3BA6NDS4 AC073130.3-201ENST00000624389 2278 ntBASIC18.97■□□□□ 0.63
TBC1D3BA6NDS4 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TBC1D3BA6NDS4 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.97■□□□□ 0.63
TBC1D3BA6NDS4 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
TBC1D3BA6NDS4 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TBC1D3BA6NDS4 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.97■□□□□ 0.63
TBC1D3BA6NDS4 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.97■□□□□ 0.63
TBC1D3BA6NDS4 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TBC1D3BA6NDS4 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
TBC1D3BA6NDS4 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TBC1D3BA6NDS4 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
TBC1D3BA6NDS4 AC006333.2-201ENST00000607957 2099 ntBASIC18.97■□□□□ 0.63
TBC1D3BA6NDS4 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
TBC1D3BA6NDS4 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
TBC1D3BA6NDS4 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.97■□□□□ 0.63
TBC1D3BA6NDS4 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TBC1D3BA6NDS4 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TBC1D3BA6NDS4 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TBC1D3BA6NDS4 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TBC1D3BA6NDS4 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TBC1D3BA6NDS4 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TBC1D3BA6NDS4 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TBC1D3BA6NDS4 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TBC1D3BA6NDS4 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TBC1D3BA6NDS4 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.96■□□□□ 0.63
TBC1D3BA6NDS4 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.96■□□□□ 0.63
TBC1D3BA6NDS4 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.96■□□□□ 0.63
TBC1D3BA6NDS4 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.96■□□□□ 0.63
TBC1D3BA6NDS4 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.96■□□□□ 0.63
TBC1D3BA6NDS4 AP002414.4-201ENST00000589764 1148 ntBASIC18.96■□□□□ 0.63
TBC1D3BA6NDS4 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.96■□□□□ 0.63
TBC1D3BA6NDS4 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.96■□□□□ 0.63
TBC1D3BA6NDS4 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.96■□□□□ 0.63
TBC1D3BA6NDS4 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TBC1D3BA6NDS4 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TBC1D3BA6NDS4 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
TBC1D3BA6NDS4 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
TBC1D3BA6NDS4 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TBC1D3BA6NDS4 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TBC1D3BA6NDS4 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TBC1D3BA6NDS4 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TBC1D3BA6NDS4 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TBC1D3BA6NDS4 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.96■□□□□ 0.63
TBC1D3BA6NDS4 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.96■□□□□ 0.63
TBC1D3BA6NDS4 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.96■□□□□ 0.63
TBC1D3BA6NDS4 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
TBC1D3BA6NDS4 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TBC1D3BA6NDS4 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.95■□□□□ 0.62
TBC1D3BA6NDS4 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.95■□□□□ 0.62
TBC1D3BA6NDS4 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.95■□□□□ 0.62
TBC1D3BA6NDS4 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
TBC1D3BA6NDS4 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
TBC1D3BA6NDS4 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TBC1D3BA6NDS4 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TBC1D3BA6NDS4 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TBC1D3BA6NDS4 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TBC1D3BA6NDS4 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.95■□□□□ 0.62
TBC1D3BA6NDS4 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TBC1D3BA6NDS4 AC026396.1-201ENST00000419388 421 ntBASIC18.95■□□□□ 0.62
TBC1D3BA6NDS4 CHCHD2P8-201ENST00000429873 447 ntBASIC18.95■□□□□ 0.62
TBC1D3BA6NDS4 AP002383.4-201ENST00000442518 975 ntBASIC18.95■□□□□ 0.62
TBC1D3BA6NDS4 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TBC1D3BA6NDS4 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TBC1D3BA6NDS4 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.95■□□□□ 0.62
TBC1D3BA6NDS4 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
TBC1D3BA6NDS4 MIR3180-1-201ENST00000580374 94 ntBASIC18.95■□□□□ 0.62
TBC1D3BA6NDS4 MIR3180-3-201ENST00000584616 94 ntBASIC18.95■□□□□ 0.62
TBC1D3BA6NDS4 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.95■□□□□ 0.62
TBC1D3BA6NDS4 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
TBC1D3BA6NDS4 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TBC1D3BA6NDS4 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TBC1D3BA6NDS4 KRT18P1-202ENST00000452408 1331 ntBASIC18.95■□□□□ 0.62
TBC1D3BA6NDS4 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TBC1D3BA6NDS4 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TBC1D3BA6NDS4 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.95■□□□□ 0.62
TBC1D3BA6NDS4 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TBC1D3BA6NDS4 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TBC1D3BA6NDS4 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.94■□□□□ 0.62
TBC1D3BA6NDS4 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TBC1D3BA6NDS4 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TBC1D3BA6NDS4 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.94■□□□□ 0.62
TBC1D3BA6NDS4 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TBC1D3BA6NDS4 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms