Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
TRIM49BA6NDI0 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.62■□□□□ 0.89
TRIM49BA6NDI0 NUDT16P1-203ENST00000513809 620 ntBASIC20.62■□□□□ 0.89
TRIM49BA6NDI0 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.62■□□□□ 0.89
TRIM49BA6NDI0 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.62■□□□□ 0.89
TRIM49BA6NDI0 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.62■□□□□ 0.89
TRIM49BA6NDI0 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
TRIM49BA6NDI0 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM49BA6NDI0 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.62■□□□□ 0.89
TRIM49BA6NDI0 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC20.62■□□□□ 0.89
TRIM49BA6NDI0 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.62■□□□□ 0.89
TRIM49BA6NDI0 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM49BA6NDI0 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM49BA6NDI0 AL135905.2-201ENST00000584934 1404 ntBASIC20.61■□□□□ 0.89
TRIM49BA6NDI0 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM49BA6NDI0 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC20.61■□□□□ 0.89
TRIM49BA6NDI0 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM49BA6NDI0 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
TRIM49BA6NDI0 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM49BA6NDI0 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM49BA6NDI0 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.61■□□□□ 0.89
TRIM49BA6NDI0 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM49BA6NDI0 AC116562.2-201ENST00000507042 360 ntBASIC20.61■□□□□ 0.89
TRIM49BA6NDI0 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM49BA6NDI0 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.61■□□□□ 0.89
TRIM49BA6NDI0 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM49BA6NDI0 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.61■□□□□ 0.89
TRIM49BA6NDI0 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM49BA6NDI0 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.61■□□□□ 0.89
TRIM49BA6NDI0 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
TRIM49BA6NDI0 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM49BA6NDI0 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM49BA6NDI0 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM49BA6NDI0 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM49BA6NDI0 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM49BA6NDI0 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM49BA6NDI0 AC096733.2-201ENST00000609937 1394 ntBASIC20.6■□□□□ 0.89
TRIM49BA6NDI0 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM49BA6NDI0 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
TRIM49BA6NDI0 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM49BA6NDI0 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM49BA6NDI0 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM49BA6NDI0 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM49BA6NDI0 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM49BA6NDI0 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM49BA6NDI0 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM49BA6NDI0 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.6■□□□□ 0.89
TRIM49BA6NDI0 UBE2SP1-201ENST00000450587 669 ntBASIC20.6■□□□□ 0.89
TRIM49BA6NDI0 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
TRIM49BA6NDI0 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.6■□□□□ 0.89
TRIM49BA6NDI0 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.6■□□□□ 0.89
TRIM49BA6NDI0 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.6■□□□□ 0.89
TRIM49BA6NDI0 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.6■□□□□ 0.89
TRIM49BA6NDI0 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
TRIM49BA6NDI0 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.6■□□□□ 0.89
TRIM49BA6NDI0 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM49BA6NDI0 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM49BA6NDI0 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM49BA6NDI0 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM49BA6NDI0 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM49BA6NDI0 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM49BA6NDI0 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC20.6■□□□□ 0.89
TRIM49BA6NDI0 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC20.6■□□□□ 0.89
TRIM49BA6NDI0 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
TRIM49BA6NDI0 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM49BA6NDI0 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.6■□□□□ 0.89
TRIM49BA6NDI0 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM49BA6NDI0 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM49BA6NDI0 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM49BA6NDI0 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM49BA6NDI0 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.59■□□□□ 0.89
TRIM49BA6NDI0 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRIM49BA6NDI0 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC20.59■□□□□ 0.89
TRIM49BA6NDI0 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
TRIM49BA6NDI0 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRIM49BA6NDI0 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRIM49BA6NDI0 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRIM49BA6NDI0 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRIM49BA6NDI0 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRIM49BA6NDI0 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.59■□□□□ 0.89
TRIM49BA6NDI0 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRIM49BA6NDI0 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC20.59■□□□□ 0.89
TRIM49BA6NDI0 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC20.59■□□□□ 0.89
TRIM49BA6NDI0 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
TRIM49BA6NDI0 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
TRIM49BA6NDI0 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRIM49BA6NDI0 MFAP1P1-201ENST00000442257 1255 ntBASIC20.59■□□□□ 0.89
TRIM49BA6NDI0 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRIM49BA6NDI0 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.59■□□□□ 0.89
TRIM49BA6NDI0 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.59■□□□□ 0.89
TRIM49BA6NDI0 REXO1L10P-201ENST00000615707 1290 ntBASIC20.59■□□□□ 0.89
TRIM49BA6NDI0 REXO1L12P-201ENST00000622156 912 ntBASIC20.59■□□□□ 0.89
TRIM49BA6NDI0 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC20.59■□□□□ 0.89
TRIM49BA6NDI0 NOC2LP1-202ENST00000452600 2235 ntBASIC20.59■□□□□ 0.89
TRIM49BA6NDI0 KRT8P45-201ENST00000414328 1447 ntBASIC20.59■□□□□ 0.89
TRIM49BA6NDI0 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRIM49BA6NDI0 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRIM49BA6NDI0 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
TRIM49BA6NDI0 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TRIM49BA6NDI0 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms