Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.02■□□□□ 0.64
TCRBV7S3A2A0A539 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
TCRBV7S3A2A0A539 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
TCRBV7S3A2A0A539 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
TCRBV7S3A2A0A539 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.02■□□□□ 0.63
TCRBV7S3A2A0A539 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TCRBV7S3A2A0A539 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TCRBV7S3A2A0A539 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TCRBV7S3A2A0A539 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TCRBV7S3A2A0A539 KRT8P45-201ENST00000414328 1447 ntBASIC19.01■□□□□ 0.63
TCRBV7S3A2A0A539 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TCRBV7S3A2A0A539 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.01■□□□□ 0.63
TCRBV7S3A2A0A539 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TCRBV7S3A2A0A539 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
TCRBV7S3A2A0A539 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TCRBV7S3A2A0A539 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.01■□□□□ 0.63
TCRBV7S3A2A0A539 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TCRBV7S3A2A0A539 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TCRBV7S3A2A0A539 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.01■□□□□ 0.63
TCRBV7S3A2A0A539 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.01■□□□□ 0.63
TCRBV7S3A2A0A539 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.01■□□□□ 0.63
TCRBV7S3A2A0A539 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.01■□□□□ 0.63
TCRBV7S3A2A0A539 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TCRBV7S3A2A0A539 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
TCRBV7S3A2A0A539 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.01■□□□□ 0.63
TCRBV7S3A2A0A539 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.01■□□□□ 0.63
TCRBV7S3A2A0A539 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.01■□□□□ 0.63
TCRBV7S3A2A0A539 AL162741.1-201ENST00000565563 1558 ntBASIC19.01■□□□□ 0.63
TCRBV7S3A2A0A539 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
TCRBV7S3A2A0A539 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TCRBV7S3A2A0A539 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TCRBV7S3A2A0A539 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
TCRBV7S3A2A0A539 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
TCRBV7S3A2A0A539 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19■□□□□ 0.63
TCRBV7S3A2A0A539 AC008556.1-201ENST00000610908 2040 ntBASIC19■□□□□ 0.63
TCRBV7S3A2A0A539 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TCRBV7S3A2A0A539 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TCRBV7S3A2A0A539 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
TCRBV7S3A2A0A539 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
TCRBV7S3A2A0A539 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19■□□□□ 0.63
TCRBV7S3A2A0A539 FAM197Y1-201ENST00000421178 764 ntBASIC19■□□□□ 0.63
TCRBV7S3A2A0A539 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
TCRBV7S3A2A0A539 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19■□□□□ 0.63
TCRBV7S3A2A0A539 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19■□□□□ 0.63
TCRBV7S3A2A0A539 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TCRBV7S3A2A0A539 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TCRBV7S3A2A0A539 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19■□□□□ 0.63
TCRBV7S3A2A0A539 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19■□□□□ 0.63
TCRBV7S3A2A0A539 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TCRBV7S3A2A0A539 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
TCRBV7S3A2A0A539 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19■□□□□ 0.63
TCRBV7S3A2A0A539 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TCRBV7S3A2A0A539 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19■□□□□ 0.63
TCRBV7S3A2A0A539 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TCRBV7S3A2A0A539 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TCRBV7S3A2A0A539 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
TCRBV7S3A2A0A539 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19■□□□□ 0.63
TCRBV7S3A2A0A539 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TCRBV7S3A2A0A539 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19■□□□□ 0.63
TCRBV7S3A2A0A539 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TCRBV7S3A2A0A539 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TCRBV7S3A2A0A539 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TCRBV7S3A2A0A539 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TCRBV7S3A2A0A539 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
TCRBV7S3A2A0A539 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.99■□□□□ 0.63
TCRBV7S3A2A0A539 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TCRBV7S3A2A0A539 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TCRBV7S3A2A0A539 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TCRBV7S3A2A0A539 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TCRBV7S3A2A0A539 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
TCRBV7S3A2A0A539 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TCRBV7S3A2A0A539 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.99■□□□□ 0.63
TCRBV7S3A2A0A539 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TCRBV7S3A2A0A539 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
TCRBV7S3A2A0A539 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.99■□□□□ 0.63
TCRBV7S3A2A0A539 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
TCRBV7S3A2A0A539 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TCRBV7S3A2A0A539 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TCRBV7S3A2A0A539 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.99■□□□□ 0.63
TCRBV7S3A2A0A539 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TCRBV7S3A2A0A539 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.99■□□□□ 0.63
TCRBV7S3A2A0A539 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TCRBV7S3A2A0A539 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TCRBV7S3A2A0A539 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
TCRBV7S3A2A0A539 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
TCRBV7S3A2A0A539 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
TCRBV7S3A2A0A539 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
TCRBV7S3A2A0A539 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TCRBV7S3A2A0A539 AC112777.1-201ENST00000540175 1423 ntBASIC18.99■□□□□ 0.63
TCRBV7S3A2A0A539 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.99■□□□□ 0.63
TCRBV7S3A2A0A539 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
TCRBV7S3A2A0A539 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.98■□□□□ 0.63
TCRBV7S3A2A0A539 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.98■□□□□ 0.63
TCRBV7S3A2A0A539 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TCRBV7S3A2A0A539 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TCRBV7S3A2A0A539 ESPNP-201ENST00000270691 2015 ntBASIC18.98■□□□□ 0.63
TCRBV7S3A2A0A539 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TCRBV7S3A2A0A539 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TCRBV7S3A2A0A539 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
TCRBV7S3A2A0A539 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms