Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
DUXBA0A1W2PPF3 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
DUXBA0A1W2PPF3 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
DUXBA0A1W2PPF3 GNE-204ENST00000539208 2190 ntTSL 2 BASIC15.26■□□□□ 0.03
DUXBA0A1W2PPF3 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
DUXBA0A1W2PPF3 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC15.26■□□□□ 0.03
DUXBA0A1W2PPF3 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DUXBA0A1W2PPF3 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
DUXBA0A1W2PPF3 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
DUXBA0A1W2PPF3 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
DUXBA0A1W2PPF3 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DUXBA0A1W2PPF3 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
DUXBA0A1W2PPF3 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC15.26■□□□□ 0.03
DUXBA0A1W2PPF3 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC15.26■□□□□ 0.03
DUXBA0A1W2PPF3 PKD1P1-201ENST00000458669 6805 ntBASIC15.26■□□□□ 0.03
DUXBA0A1W2PPF3 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
DUXBA0A1W2PPF3 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DUXBA0A1W2PPF3 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
DUXBA0A1W2PPF3 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DUXBA0A1W2PPF3 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
DUXBA0A1W2PPF3 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC15.26■□□□□ 0.03
DUXBA0A1W2PPF3 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC15.26■□□□□ 0.03
DUXBA0A1W2PPF3 RGMA-211ENST00000557420 989 ntTSL 3 BASIC15.26■□□□□ 0.03
DUXBA0A1W2PPF3 AC105036.2-201ENST00000569468 176 ntBASIC15.26■□□□□ 0.03
DUXBA0A1W2PPF3 FST-202ENST00000396947 2538 ntTSL 5 BASIC15.26■□□□□ 0.03
DUXBA0A1W2PPF3 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DUXBA0A1W2PPF3 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DUXBA0A1W2PPF3 FLJ13224-201ENST00000313737 1514 ntBASIC15.26■□□□□ 0.03
DUXBA0A1W2PPF3 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DUXBA0A1W2PPF3 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DUXBA0A1W2PPF3 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC15.26■□□□□ 0.03
DUXBA0A1W2PPF3 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DUXBA0A1W2PPF3 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DUXBA0A1W2PPF3 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
DUXBA0A1W2PPF3 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DUXBA0A1W2PPF3 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
DUXBA0A1W2PPF3 KRT8P32-201ENST00000512863 1461 ntBASIC15.26■□□□□ 0.03
DUXBA0A1W2PPF3 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DUXBA0A1W2PPF3 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
DUXBA0A1W2PPF3 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC15.26■□□□□ 0.03
DUXBA0A1W2PPF3 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
DUXBA0A1W2PPF3 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DUXBA0A1W2PPF3 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
DUXBA0A1W2PPF3 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DUXBA0A1W2PPF3 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DUXBA0A1W2PPF3 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
DUXBA0A1W2PPF3 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
DUXBA0A1W2PPF3 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC15.25■□□□□ 0.03
DUXBA0A1W2PPF3 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
DUXBA0A1W2PPF3 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
DUXBA0A1W2PPF3 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
DUXBA0A1W2PPF3 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
DUXBA0A1W2PPF3 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
DUXBA0A1W2PPF3 AL499627.1-201ENST00000569373 2188 ntBASIC15.25■□□□□ 0.03
DUXBA0A1W2PPF3 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
DUXBA0A1W2PPF3 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
DUXBA0A1W2PPF3 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
DUXBA0A1W2PPF3 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
DUXBA0A1W2PPF3 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
DUXBA0A1W2PPF3 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
DUXBA0A1W2PPF3 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC15.25■□□□□ 0.03
DUXBA0A1W2PPF3 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
DUXBA0A1W2PPF3 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
DUXBA0A1W2PPF3 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
DUXBA0A1W2PPF3 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC15.25■□□□□ 0.03
DUXBA0A1W2PPF3 OR2A1-AS1-201ENST00000462305 773 ntBASIC15.25■□□□□ 0.03
DUXBA0A1W2PPF3 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC15.25■□□□□ 0.03
DUXBA0A1W2PPF3 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC15.25■□□□□ 0.03
DUXBA0A1W2PPF3 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC15.25■□□□□ 0.03
DUXBA0A1W2PPF3 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC15.25■□□□□ 0.03
DUXBA0A1W2PPF3 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC15.25■□□□□ 0.03
DUXBA0A1W2PPF3 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC15.25■□□□□ 0.03
DUXBA0A1W2PPF3 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
DUXBA0A1W2PPF3 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
DUXBA0A1W2PPF3 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
DUXBA0A1W2PPF3 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
DUXBA0A1W2PPF3 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
DUXBA0A1W2PPF3 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
DUXBA0A1W2PPF3 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
DUXBA0A1W2PPF3 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
DUXBA0A1W2PPF3 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
DUXBA0A1W2PPF3 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
DUXBA0A1W2PPF3 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
DUXBA0A1W2PPF3 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC15.24■□□□□ 0.03
DUXBA0A1W2PPF3 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC15.24■□□□□ 0.03
DUXBA0A1W2PPF3 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
DUXBA0A1W2PPF3 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
DUXBA0A1W2PPF3 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
DUXBA0A1W2PPF3 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
DUXBA0A1W2PPF3 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
DUXBA0A1W2PPF3 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
DUXBA0A1W2PPF3 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
DUXBA0A1W2PPF3 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
DUXBA0A1W2PPF3 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
DUXBA0A1W2PPF3 DUSP5P2-201ENST00000426873 1033 ntBASIC15.24■□□□□ 0.03
DUXBA0A1W2PPF3 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC15.24■□□□□ 0.03
DUXBA0A1W2PPF3 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC15.24■□□□□ 0.03
DUXBA0A1W2PPF3 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC15.24■□□□□ 0.03
DUXBA0A1W2PPF3 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC15.24■□□□□ 0.03
DUXBA0A1W2PPF3 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms