Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC13.94□□□□□ -0.18
TRAV21A0A0B4J279 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV21A0A0B4J279 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
TRAV21A0A0B4J279 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV21A0A0B4J279 ABALON-201ENST00000629058 1903 ntBASIC13.94□□□□□ -0.18
TRAV21A0A0B4J279 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV21A0A0B4J279 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV21A0A0B4J279 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV21A0A0B4J279 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
TRAV21A0A0B4J279 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV21A0A0B4J279 AC026471.1-201ENST00000564629 3026 ntBASIC13.93□□□□□ -0.18
TRAV21A0A0B4J279 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV21A0A0B4J279 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV21A0A0B4J279 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC13.93□□□□□ -0.18
TRAV21A0A0B4J279 AC018470.1-201ENST00000624790 3129 ntBASIC13.93□□□□□ -0.18
TRAV21A0A0B4J279 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV21A0A0B4J279 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC13.93□□□□□ -0.18
TRAV21A0A0B4J279 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV21A0A0B4J279 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
TRAV21A0A0B4J279 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC13.93□□□□□ -0.18
TRAV21A0A0B4J279 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV21A0A0B4J279 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC13.93□□□□□ -0.18
TRAV21A0A0B4J279 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
TRAV21A0A0B4J279 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV21A0A0B4J279 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
TRAV21A0A0B4J279 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC13.93□□□□□ -0.18
TRAV21A0A0B4J279 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC13.93□□□□□ -0.18
TRAV21A0A0B4J279 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV21A0A0B4J279 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC13.93□□□□□ -0.18
TRAV21A0A0B4J279 F2R-202ENST00000505600 442 ntTSL 2 BASIC13.93□□□□□ -0.18
TRAV21A0A0B4J279 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC13.93□□□□□ -0.18
TRAV21A0A0B4J279 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV21A0A0B4J279 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC13.93□□□□□ -0.18
TRAV21A0A0B4J279 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV21A0A0B4J279 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
TRAV21A0A0B4J279 HEIH-201ENST00000623091 1652 ntBASIC13.93□□□□□ -0.18
TRAV21A0A0B4J279 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV21A0A0B4J279 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV21A0A0B4J279 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV21A0A0B4J279 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV21A0A0B4J279 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
TRAV21A0A0B4J279 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV21A0A0B4J279 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV21A0A0B4J279 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV21A0A0B4J279 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
TRAV21A0A0B4J279 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV21A0A0B4J279 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
TRAV21A0A0B4J279 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV21A0A0B4J279 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC13.93□□□□□ -0.18
TRAV21A0A0B4J279 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV21A0A0B4J279 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV21A0A0B4J279 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV21A0A0B4J279 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV21A0A0B4J279 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
TRAV21A0A0B4J279 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC13.93□□□□□ -0.18
TRAV21A0A0B4J279 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
TRAV21A0A0B4J279 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV21A0A0B4J279 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV21A0A0B4J279 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC13.92□□□□□ -0.18
TRAV21A0A0B4J279 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV21A0A0B4J279 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV21A0A0B4J279 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV21A0A0B4J279 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC13.92□□□□□ -0.18
TRAV21A0A0B4J279 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV21A0A0B4J279 LETM1P2-201ENST00000597330 2178 ntBASIC13.92□□□□□ -0.18
TRAV21A0A0B4J279 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV21A0A0B4J279 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV21A0A0B4J279 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
TRAV21A0A0B4J279 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC13.92□□□□□ -0.18
TRAV21A0A0B4J279 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV21A0A0B4J279 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
TRAV21A0A0B4J279 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV21A0A0B4J279 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV21A0A0B4J279 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC13.92□□□□□ -0.18
TRAV21A0A0B4J279 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
TRAV21A0A0B4J279 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV21A0A0B4J279 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC13.92□□□□□ -0.18
TRAV21A0A0B4J279 GXYLT1P5-201ENST00000614548 1189 ntBASIC13.92□□□□□ -0.18
TRAV21A0A0B4J279 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC13.92□□□□□ -0.18
TRAV21A0A0B4J279 NOC2LP1-202ENST00000452600 2235 ntBASIC13.92□□□□□ -0.18
TRAV21A0A0B4J279 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV21A0A0B4J279 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV21A0A0B4J279 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC13.92□□□□□ -0.18
TRAV21A0A0B4J279 SNAI3-AS1-205ENST00000568633 2096 ntBASIC13.92□□□□□ -0.18
TRAV21A0A0B4J279 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV21A0A0B4J279 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV21A0A0B4J279 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV21A0A0B4J279 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV21A0A0B4J279 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
TRAV21A0A0B4J279 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV21A0A0B4J279 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
TRAV21A0A0B4J279 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV21A0A0B4J279 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV21A0A0B4J279 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC13.91□□□□□ -0.18
TRAV21A0A0B4J279 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
TRAV21A0A0B4J279 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV21A0A0B4J279 EML3-217ENST00000531557 2509 ntTSL 5 BASIC13.91□□□□□ -0.18
TRAV21A0A0B4J279 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV21A0A0B4J279 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
TRAV21A0A0B4J279 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms