Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRBV6-7A0A0A0MS04 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC15.66■□□□□ 0.1
TRBV6-7A0A0A0MS04 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRBV6-7A0A0A0MS04 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRBV6-7A0A0A0MS04 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC15.66■□□□□ 0.1
TRBV6-7A0A0A0MS04 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC15.66■□□□□ 0.1
TRBV6-7A0A0A0MS04 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
TRBV6-7A0A0A0MS04 GLRB-205ENST00000512619 728 ntTSL 3 BASIC15.66■□□□□ 0.1
TRBV6-7A0A0A0MS04 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
TRBV6-7A0A0A0MS04 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRBV6-7A0A0A0MS04 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
TRBV6-7A0A0A0MS04 HEIH-201ENST00000623091 1652 ntBASIC15.66■□□□□ 0.1
TRBV6-7A0A0A0MS04 EML3-212ENST00000494176 2901 ntTSL 2 BASIC15.66■□□□□ 0.1
TRBV6-7A0A0A0MS04 EML3-216ENST00000529309 2909 ntTSL 2 BASIC15.66■□□□□ 0.1
TRBV6-7A0A0A0MS04 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRBV6-7A0A0A0MS04 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRBV6-7A0A0A0MS04 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC15.66■□□□□ 0.1
TRBV6-7A0A0A0MS04 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRBV6-7A0A0A0MS04 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRBV6-7A0A0A0MS04 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC15.66■□□□□ 0.1
TRBV6-7A0A0A0MS04 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC15.65■□□□□ 0.1
TRBV6-7A0A0A0MS04 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV6-7A0A0A0MS04 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC15.65■□□□□ 0.1
TRBV6-7A0A0A0MS04 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV6-7A0A0A0MS04 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV6-7A0A0A0MS04 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC15.65■□□□□ 0.1
TRBV6-7A0A0A0MS04 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV6-7A0A0A0MS04 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV6-7A0A0A0MS04 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV6-7A0A0A0MS04 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV6-7A0A0A0MS04 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV6-7A0A0A0MS04 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV6-7A0A0A0MS04 SLC25A6P5-201ENST00000435663 894 ntBASIC15.65■□□□□ 0.1
TRBV6-7A0A0A0MS04 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV6-7A0A0A0MS04 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC15.65■□□□□ 0.1
TRBV6-7A0A0A0MS04 MTDHP1-201ENST00000605323 784 ntBASIC15.65■□□□□ 0.1
TRBV6-7A0A0A0MS04 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV6-7A0A0A0MS04 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV6-7A0A0A0MS04 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
TRBV6-7A0A0A0MS04 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV6-7A0A0A0MS04 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC15.65■□□□□ 0.1
TRBV6-7A0A0A0MS04 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV6-7A0A0A0MS04 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV6-7A0A0A0MS04 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV6-7A0A0A0MS04 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV6-7A0A0A0MS04 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC15.65■□□□□ 0.1
TRBV6-7A0A0A0MS04 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV6-7A0A0A0MS04 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV6-7A0A0A0MS04 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV6-7A0A0A0MS04 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC15.65■□□□□ 0.1
TRBV6-7A0A0A0MS04 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
TRBV6-7A0A0A0MS04 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV6-7A0A0A0MS04 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV6-7A0A0A0MS04 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV6-7A0A0A0MS04 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV6-7A0A0A0MS04 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV6-7A0A0A0MS04 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV6-7A0A0A0MS04 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV6-7A0A0A0MS04 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV6-7A0A0A0MS04 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
TRBV6-7A0A0A0MS04 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC15.64■□□□□ 0.09
TRBV6-7A0A0A0MS04 GAS7-202ENST00000396115 929 ntTSL 5 BASIC15.64■□□□□ 0.09
TRBV6-7A0A0A0MS04 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC15.64■□□□□ 0.09
TRBV6-7A0A0A0MS04 KRT17P3-201ENST00000420566 1262 ntBASIC15.64■□□□□ 0.09
TRBV6-7A0A0A0MS04 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV6-7A0A0A0MS04 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV6-7A0A0A0MS04 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV6-7A0A0A0MS04 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV6-7A0A0A0MS04 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV6-7A0A0A0MS04 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC15.64■□□□□ 0.09
TRBV6-7A0A0A0MS04 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV6-7A0A0A0MS04 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC15.64■□□□□ 0.09
TRBV6-7A0A0A0MS04 RCC2P6-201ENST00000526625 1557 ntBASIC15.64■□□□□ 0.09
TRBV6-7A0A0A0MS04 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC15.64■□□□□ 0.09
TRBV6-7A0A0A0MS04 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC15.64■□□□□ 0.09
TRBV6-7A0A0A0MS04 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV6-7A0A0A0MS04 CEP83-AS1-201ENST00000623122 2482 ntBASIC15.64■□□□□ 0.09
TRBV6-7A0A0A0MS04 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV6-7A0A0A0MS04 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV6-7A0A0A0MS04 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV6-7A0A0A0MS04 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV6-7A0A0A0MS04 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV6-7A0A0A0MS04 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC15.64■□□□□ 0.09
TRBV6-7A0A0A0MS04 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV6-7A0A0A0MS04 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV6-7A0A0A0MS04 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV6-7A0A0A0MS04 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV6-7A0A0A0MS04 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV6-7A0A0A0MS04 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC15.63■□□□□ 0.09
TRBV6-7A0A0A0MS04 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC15.63■□□□□ 0.09
TRBV6-7A0A0A0MS04 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV6-7A0A0A0MS04 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC15.63■□□□□ 0.09
TRBV6-7A0A0A0MS04 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC15.63■□□□□ 0.09
TRBV6-7A0A0A0MS04 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
TRBV6-7A0A0A0MS04 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV6-7A0A0A0MS04 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV6-7A0A0A0MS04 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC15.63■□□□□ 0.09
TRBV6-7A0A0A0MS04 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV6-7A0A0A0MS04 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
TRBV6-7A0A0A0MS04 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms