Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV30A0A087WSZ9 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC14.71□□□□□ -0.05
TRAV30A0A087WSZ9 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV30A0A087WSZ9 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV30A0A087WSZ9 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV30A0A087WSZ9 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV30A0A087WSZ9 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV30A0A087WSZ9 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV30A0A087WSZ9 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC14.71□□□□□ -0.05
TRAV30A0A087WSZ9 ESRRAP1-201ENST00000400596 1257 ntBASIC14.71□□□□□ -0.05
TRAV30A0A087WSZ9 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
TRAV30A0A087WSZ9 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV30A0A087WSZ9 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC14.71□□□□□ -0.05
TRAV30A0A087WSZ9 AP002982.1-201ENST00000492365 877 ntBASIC14.71□□□□□ -0.05
TRAV30A0A087WSZ9 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC14.71□□□□□ -0.05
TRAV30A0A087WSZ9 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV30A0A087WSZ9 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC14.71□□□□□ -0.05
TRAV30A0A087WSZ9 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC14.71□□□□□ -0.06
TRAV30A0A087WSZ9 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TRAV30A0A087WSZ9 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV30A0A087WSZ9 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
TRAV30A0A087WSZ9 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
TRAV30A0A087WSZ9 AL356309.3-201ENST00000624132 1934 ntBASIC14.7□□□□□ -0.06
TRAV30A0A087WSZ9 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
TRAV30A0A087WSZ9 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV30A0A087WSZ9 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV30A0A087WSZ9 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV30A0A087WSZ9 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV30A0A087WSZ9 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV30A0A087WSZ9 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV30A0A087WSZ9 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC14.7□□□□□ -0.06
TRAV30A0A087WSZ9 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV30A0A087WSZ9 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV30A0A087WSZ9 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV30A0A087WSZ9 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV30A0A087WSZ9 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV30A0A087WSZ9 ISG20-202ENST00000379224 540 ntTSL 3 BASIC14.7□□□□□ -0.06
TRAV30A0A087WSZ9 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC14.7□□□□□ -0.06
TRAV30A0A087WSZ9 NIFKP9-201ENST00000419265 221 ntBASIC14.7□□□□□ -0.06
TRAV30A0A087WSZ9 DERL1-203ENST00000419562 918 ntTSL 2 BASIC14.7□□□□□ -0.06
TRAV30A0A087WSZ9 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
TRAV30A0A087WSZ9 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
TRAV30A0A087WSZ9 Z85996.1-201ENST00000494644 937 ntBASIC14.7□□□□□ -0.06
TRAV30A0A087WSZ9 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC14.7□□□□□ -0.06
TRAV30A0A087WSZ9 RN7SL471P-201ENST00000580476 299 ntBASIC14.7□□□□□ -0.06
TRAV30A0A087WSZ9 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC14.7□□□□□ -0.06
TRAV30A0A087WSZ9 AC124016.1-201ENST00000609552 612 ntBASIC14.7□□□□□ -0.06
TRAV30A0A087WSZ9 AL353708.3-201ENST00000610272 989 ntBASIC14.7□□□□□ -0.06
TRAV30A0A087WSZ9 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
TRAV30A0A087WSZ9 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC14.7□□□□□ -0.06
TRAV30A0A087WSZ9 TBCB-214ENST00000629269 413 ntTSL 5 BASIC14.7□□□□□ -0.06
TRAV30A0A087WSZ9 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV30A0A087WSZ9 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV30A0A087WSZ9 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC14.7□□□□□ -0.06
TRAV30A0A087WSZ9 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV30A0A087WSZ9 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV30A0A087WSZ9 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV30A0A087WSZ9 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV30A0A087WSZ9 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV30A0A087WSZ9 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC14.7□□□□□ -0.06
TRAV30A0A087WSZ9 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV30A0A087WSZ9 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV30A0A087WSZ9 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV30A0A087WSZ9 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAV30A0A087WSZ9 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV30A0A087WSZ9 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
TRAV30A0A087WSZ9 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV30A0A087WSZ9 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV30A0A087WSZ9 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC14.69□□□□□ -0.06
TRAV30A0A087WSZ9 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC14.69□□□□□ -0.06
TRAV30A0A087WSZ9 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV30A0A087WSZ9 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV30A0A087WSZ9 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
TRAV30A0A087WSZ9 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV30A0A087WSZ9 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV30A0A087WSZ9 HEIH-201ENST00000623091 1652 ntBASIC14.69□□□□□ -0.06
TRAV30A0A087WSZ9 USP49-202ENST00000373010 2446 ntTSL 5 BASIC14.69□□□□□ -0.06
TRAV30A0A087WSZ9 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV30A0A087WSZ9 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAV30A0A087WSZ9 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV30A0A087WSZ9 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
TRAV30A0A087WSZ9 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC14.69□□□□□ -0.06
TRAV30A0A087WSZ9 POU5F1P3-201ENST00000428824 1078 ntBASIC14.69□□□□□ -0.06
TRAV30A0A087WSZ9 KSR1P1-201ENST00000446298 240 ntBASIC14.69□□□□□ -0.06
TRAV30A0A087WSZ9 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAV30A0A087WSZ9 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAV30A0A087WSZ9 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC14.69□□□□□ -0.06
TRAV30A0A087WSZ9 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
TRAV30A0A087WSZ9 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC14.69□□□□□ -0.06
TRAV30A0A087WSZ9 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV30A0A087WSZ9 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC14.69□□□□□ -0.06
TRAV30A0A087WSZ9 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV30A0A087WSZ9 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAV30A0A087WSZ9 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC14.69□□□□□ -0.06
TRAV30A0A087WSZ9 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV30A0A087WSZ9 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV30A0A087WSZ9 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV30A0A087WSZ9 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV30A0A087WSZ9 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
TRAV30A0A087WSZ9 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms