Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
DDX49Q9Y6V7 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
DDX49Q9Y6V7 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC22.46■■□□□ 1.19
DDX49Q9Y6V7 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
DDX49Q9Y6V7 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
DDX49Q9Y6V7 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
DDX49Q9Y6V7 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
DDX49Q9Y6V7 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
DDX49Q9Y6V7 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC22.46■■□□□ 1.19
DDX49Q9Y6V7 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
DDX49Q9Y6V7 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC22.46■■□□□ 1.19
DDX49Q9Y6V7 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
DDX49Q9Y6V7 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
DDX49Q9Y6V7 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.19
DDX49Q9Y6V7 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC22.45■■□□□ 1.19
DDX49Q9Y6V7 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC22.45■■□□□ 1.18
DDX49Q9Y6V7 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
DDX49Q9Y6V7 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
DDX49Q9Y6V7 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
DDX49Q9Y6V7 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC22.45■■□□□ 1.18
DDX49Q9Y6V7 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC22.45■■□□□ 1.18
DDX49Q9Y6V7 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
DDX49Q9Y6V7 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
DDX49Q9Y6V7 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.18
DDX49Q9Y6V7 AC116351.2-201ENST00000606540 1585 ntBASIC22.45■■□□□ 1.18
DDX49Q9Y6V7 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
DDX49Q9Y6V7 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
DDX49Q9Y6V7 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC22.45■■□□□ 1.18
DDX49Q9Y6V7 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
DDX49Q9Y6V7 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC22.45■■□□□ 1.18
DDX49Q9Y6V7 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
DDX49Q9Y6V7 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC22.45■■□□□ 1.18
DDX49Q9Y6V7 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
DDX49Q9Y6V7 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
DDX49Q9Y6V7 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
DDX49Q9Y6V7 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC22.44■■□□□ 1.18
DDX49Q9Y6V7 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC22.44■■□□□ 1.18
DDX49Q9Y6V7 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
DDX49Q9Y6V7 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
DDX49Q9Y6V7 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
DDX49Q9Y6V7 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
DDX49Q9Y6V7 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
DDX49Q9Y6V7 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC22.44■■□□□ 1.18
DDX49Q9Y6V7 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
DDX49Q9Y6V7 AL354751.1-201ENST00000412768 1863 ntBASIC22.44■■□□□ 1.18
DDX49Q9Y6V7 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC22.44■■□□□ 1.18
DDX49Q9Y6V7 TFP1-202ENST00000475455 1573 ntBASIC22.44■■□□□ 1.18
DDX49Q9Y6V7 AP006587.1-201ENST00000534129 1502 ntBASIC22.44■■□□□ 1.18
DDX49Q9Y6V7 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
DDX49Q9Y6V7 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
DDX49Q9Y6V7 FP475955.4-201ENST00000623131 1990 ntBASIC22.44■■□□□ 1.18
DDX49Q9Y6V7 ABBA01031674.1-201ENST00000635145 728 ntBASIC22.44■■□□□ 1.18
DDX49Q9Y6V7 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
DDX49Q9Y6V7 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC22.43■■□□□ 1.18
DDX49Q9Y6V7 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
DDX49Q9Y6V7 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC22.43■■□□□ 1.18
DDX49Q9Y6V7 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
DDX49Q9Y6V7 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
DDX49Q9Y6V7 Z98044.1-201ENST00000632503 1764 ntBASIC22.43■■□□□ 1.18
DDX49Q9Y6V7 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC22.43■■□□□ 1.18
DDX49Q9Y6V7 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC22.43■■□□□ 1.18
DDX49Q9Y6V7 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
DDX49Q9Y6V7 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC22.43■■□□□ 1.18
DDX49Q9Y6V7 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
DDX49Q9Y6V7 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
DDX49Q9Y6V7 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
DDX49Q9Y6V7 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC22.43■■□□□ 1.18
DDX49Q9Y6V7 MESTP1-201ENST00000404287 994 ntBASIC22.43■■□□□ 1.18
DDX49Q9Y6V7 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC22.43■■□□□ 1.18
DDX49Q9Y6V7 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC22.43■■□□□ 1.18
DDX49Q9Y6V7 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
DDX49Q9Y6V7 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
DDX49Q9Y6V7 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
DDX49Q9Y6V7 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
DDX49Q9Y6V7 NOC2LP1-202ENST00000452600 2235 ntBASIC22.43■■□□□ 1.18
DDX49Q9Y6V7 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
DDX49Q9Y6V7 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
DDX49Q9Y6V7 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
DDX49Q9Y6V7 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
DDX49Q9Y6V7 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
DDX49Q9Y6V7 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC22.43■■□□□ 1.18
DDX49Q9Y6V7 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC22.43■■□□□ 1.18
DDX49Q9Y6V7 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC22.42■■□□□ 1.18
DDX49Q9Y6V7 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC22.42■■□□□ 1.18
DDX49Q9Y6V7 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC22.42■■□□□ 1.18
DDX49Q9Y6V7 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC22.42■■□□□ 1.18
DDX49Q9Y6V7 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
DDX49Q9Y6V7 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
DDX49Q9Y6V7 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
DDX49Q9Y6V7 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
DDX49Q9Y6V7 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
DDX49Q9Y6V7 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
DDX49Q9Y6V7 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
DDX49Q9Y6V7 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
DDX49Q9Y6V7 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
DDX49Q9Y6V7 USP39-202ENST00000409025 1946 ntTSL 5 BASIC22.42■■□□□ 1.18
DDX49Q9Y6V7 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC22.42■■□□□ 1.18
DDX49Q9Y6V7 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC22.42■■□□□ 1.18
DDX49Q9Y6V7 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC22.42■■□□□ 1.18
DDX49Q9Y6V7 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC22.42■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms