Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GPC6Q9Y625 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
GPC6Q9Y625 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GPC6Q9Y625 TSPY21P-201ENST00000433481 731 ntBASIC17.71■□□□□ 0.43
GPC6Q9Y625 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
GPC6Q9Y625 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
GPC6Q9Y625 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.71■□□□□ 0.43
GPC6Q9Y625 HLA-A-209ENST00000638375 975 ntBASIC17.71■□□□□ 0.43
GPC6Q9Y625 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
GPC6Q9Y625 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GPC6Q9Y625 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
GPC6Q9Y625 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GPC6Q9Y625 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.71■□□□□ 0.43
GPC6Q9Y625 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
GPC6Q9Y625 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
GPC6Q9Y625 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.7■□□□□ 0.42
GPC6Q9Y625 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
GPC6Q9Y625 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.7■□□□□ 0.42
GPC6Q9Y625 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.7■□□□□ 0.42
GPC6Q9Y625 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
GPC6Q9Y625 AL160286.2-201ENST00000567150 934 ntBASIC17.7■□□□□ 0.42
GPC6Q9Y625 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.7■□□□□ 0.42
GPC6Q9Y625 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.7■□□□□ 0.42
GPC6Q9Y625 AL359736.2-201ENST00000621992 437 ntBASIC17.7■□□□□ 0.42
GPC6Q9Y625 FAM197Y4-202ENST00000622692 608 ntBASIC17.7■□□□□ 0.42
GPC6Q9Y625 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.7■□□□□ 0.42
GPC6Q9Y625 TMEM191A-211ENST00000637163 1067 ntBASIC17.7■□□□□ 0.42
GPC6Q9Y625 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GPC6Q9Y625 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GPC6Q9Y625 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.7■□□□□ 0.42
GPC6Q9Y625 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
GPC6Q9Y625 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
GPC6Q9Y625 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.7■□□□□ 0.42
GPC6Q9Y625 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.7■□□□□ 0.42
GPC6Q9Y625 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.7■□□□□ 0.42
GPC6Q9Y625 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GPC6Q9Y625 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GPC6Q9Y625 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
GPC6Q9Y625 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GPC6Q9Y625 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.7■□□□□ 0.42
GPC6Q9Y625 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
GPC6Q9Y625 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
GPC6Q9Y625 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
GPC6Q9Y625 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GPC6Q9Y625 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
GPC6Q9Y625 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.69■□□□□ 0.42
GPC6Q9Y625 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
GPC6Q9Y625 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.69■□□□□ 0.42
GPC6Q9Y625 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GPC6Q9Y625 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.69■□□□□ 0.42
GPC6Q9Y625 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
GPC6Q9Y625 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
GPC6Q9Y625 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
GPC6Q9Y625 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
GPC6Q9Y625 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
GPC6Q9Y625 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
GPC6Q9Y625 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
GPC6Q9Y625 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GPC6Q9Y625 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.69■□□□□ 0.42
GPC6Q9Y625 AC142381.4-202ENST00000563973 229 ntBASIC17.69■□□□□ 0.42
GPC6Q9Y625 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
GPC6Q9Y625 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GPC6Q9Y625 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
GPC6Q9Y625 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GPC6Q9Y625 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GPC6Q9Y625 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
GPC6Q9Y625 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.69■□□□□ 0.42
GPC6Q9Y625 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
GPC6Q9Y625 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.69■□□□□ 0.42
GPC6Q9Y625 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
GPC6Q9Y625 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
GPC6Q9Y625 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.68■□□□□ 0.42
GPC6Q9Y625 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.68■□□□□ 0.42
GPC6Q9Y625 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
GPC6Q9Y625 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
GPC6Q9Y625 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GPC6Q9Y625 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
GPC6Q9Y625 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GPC6Q9Y625 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
GPC6Q9Y625 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GPC6Q9Y625 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GPC6Q9Y625 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
GPC6Q9Y625 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
GPC6Q9Y625 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GPC6Q9Y625 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
GPC6Q9Y625 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.68■□□□□ 0.42
GPC6Q9Y625 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GPC6Q9Y625 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.68■□□□□ 0.42
GPC6Q9Y625 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
GPC6Q9Y625 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.68■□□□□ 0.42
GPC6Q9Y625 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.68■□□□□ 0.42
GPC6Q9Y625 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.68■□□□□ 0.42
GPC6Q9Y625 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.68■□□□□ 0.42
GPC6Q9Y625 AC083906.6-201ENST00000641366 219 ntBASIC17.68■□□□□ 0.42
GPC6Q9Y625 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GPC6Q9Y625 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
GPC6Q9Y625 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
GPC6Q9Y625 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.68■□□□□ 0.42
GPC6Q9Y625 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
GPC6Q9Y625 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms