Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HCFC2Q9Y5Z7 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HCFC2Q9Y5Z7 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HCFC2Q9Y5Z7 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
HCFC2Q9Y5Z7 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
HCFC2Q9Y5Z7 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.55■□□□□ 0.72
HCFC2Q9Y5Z7 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HCFC2Q9Y5Z7 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HCFC2Q9Y5Z7 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
HCFC2Q9Y5Z7 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HCFC2Q9Y5Z7 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HCFC2Q9Y5Z7 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
HCFC2Q9Y5Z7 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
HCFC2Q9Y5Z7 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
HCFC2Q9Y5Z7 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.55■□□□□ 0.72
HCFC2Q9Y5Z7 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HCFC2Q9Y5Z7 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.55■□□□□ 0.72
HCFC2Q9Y5Z7 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.55■□□□□ 0.72
HCFC2Q9Y5Z7 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.55■□□□□ 0.72
HCFC2Q9Y5Z7 AL671883.3-201ENST00000603274 991 ntBASIC19.55■□□□□ 0.72
HCFC2Q9Y5Z7 AC024563.2-201ENST00000603282 481 ntBASIC19.55■□□□□ 0.72
HCFC2Q9Y5Z7 BX640515.1-201ENST00000617215 977 ntBASIC19.55■□□□□ 0.72
HCFC2Q9Y5Z7 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.55■□□□□ 0.72
HCFC2Q9Y5Z7 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HCFC2Q9Y5Z7 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
HCFC2Q9Y5Z7 NSUN5P1-202ENST00000421140 1535 ntBASIC19.55■□□□□ 0.72
HCFC2Q9Y5Z7 NSUN5P2-203ENST00000457352 1529 ntBASIC19.55■□□□□ 0.72
HCFC2Q9Y5Z7 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
HCFC2Q9Y5Z7 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HCFC2Q9Y5Z7 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.55■□□□□ 0.72
HCFC2Q9Y5Z7 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HCFC2Q9Y5Z7 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.54■□□□□ 0.72
HCFC2Q9Y5Z7 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HCFC2Q9Y5Z7 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.54■□□□□ 0.72
HCFC2Q9Y5Z7 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HCFC2Q9Y5Z7 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HCFC2Q9Y5Z7 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HCFC2Q9Y5Z7 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HCFC2Q9Y5Z7 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HCFC2Q9Y5Z7 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HCFC2Q9Y5Z7 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
HCFC2Q9Y5Z7 TEX30-205ENST00000376029 959 ntTSL 2 BASIC19.54■□□□□ 0.72
HCFC2Q9Y5Z7 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
HCFC2Q9Y5Z7 SAPCD2P3-201ENST00000455031 850 ntBASIC19.54■□□□□ 0.72
HCFC2Q9Y5Z7 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC19.54■□□□□ 0.72
HCFC2Q9Y5Z7 AP005901.3-202ENST00000581653 237 ntBASIC19.54■□□□□ 0.72
HCFC2Q9Y5Z7 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.54■□□□□ 0.72
HCFC2Q9Y5Z7 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.54■□□□□ 0.72
HCFC2Q9Y5Z7 REXO1L6P-202ENST00000619970 1078 ntBASIC19.54■□□□□ 0.72
HCFC2Q9Y5Z7 CCNC-219ENST00000627680 896 ntTSL 5 BASIC19.54■□□□□ 0.72
HCFC2Q9Y5Z7 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
HCFC2Q9Y5Z7 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.54■□□□□ 0.72
HCFC2Q9Y5Z7 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HCFC2Q9Y5Z7 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
HCFC2Q9Y5Z7 TREX1-205ENST00000625293 1783 ntBASIC19.54■□□□□ 0.72
HCFC2Q9Y5Z7 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.54■□□□□ 0.72
HCFC2Q9Y5Z7 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.54■□□□□ 0.72
HCFC2Q9Y5Z7 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.54■□□□□ 0.72
HCFC2Q9Y5Z7 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
HCFC2Q9Y5Z7 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HCFC2Q9Y5Z7 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
HCFC2Q9Y5Z7 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HCFC2Q9Y5Z7 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HCFC2Q9Y5Z7 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
HCFC2Q9Y5Z7 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
HCFC2Q9Y5Z7 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC19.53■□□□□ 0.72
HCFC2Q9Y5Z7 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HCFC2Q9Y5Z7 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HCFC2Q9Y5Z7 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HCFC2Q9Y5Z7 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.53■□□□□ 0.72
HCFC2Q9Y5Z7 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.53■□□□□ 0.72
HCFC2Q9Y5Z7 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
HCFC2Q9Y5Z7 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HCFC2Q9Y5Z7 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.53■□□□□ 0.72
HCFC2Q9Y5Z7 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
HCFC2Q9Y5Z7 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC19.53■□□□□ 0.72
HCFC2Q9Y5Z7 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.53■□□□□ 0.72
HCFC2Q9Y5Z7 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19.53■□□□□ 0.72
HCFC2Q9Y5Z7 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HCFC2Q9Y5Z7 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HCFC2Q9Y5Z7 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HCFC2Q9Y5Z7 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HCFC2Q9Y5Z7 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.53■□□□□ 0.72
HCFC2Q9Y5Z7 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
HCFC2Q9Y5Z7 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HCFC2Q9Y5Z7 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.53■□□□□ 0.72
HCFC2Q9Y5Z7 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
HCFC2Q9Y5Z7 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HCFC2Q9Y5Z7 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HCFC2Q9Y5Z7 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HCFC2Q9Y5Z7 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HCFC2Q9Y5Z7 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.52■□□□□ 0.72
HCFC2Q9Y5Z7 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HCFC2Q9Y5Z7 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
HCFC2Q9Y5Z7 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HCFC2Q9Y5Z7 FEM1AP3-201ENST00000403722 1741 ntBASIC19.52■□□□□ 0.72
HCFC2Q9Y5Z7 NUS1P2-201ENST00000417358 873 ntBASIC19.52■□□□□ 0.72
HCFC2Q9Y5Z7 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.52■□□□□ 0.72
HCFC2Q9Y5Z7 AL590627.1-203ENST00000421194 1026 ntBASIC19.52■□□□□ 0.72
HCFC2Q9Y5Z7 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms