Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHAC2Q9Y5I4 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHAC2Q9Y5I4 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHAC2Q9Y5I4 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHAC2Q9Y5I4 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHAC2Q9Y5I4 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHAC2Q9Y5I4 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC22.24■■□□□ 1.15
PCDHAC2Q9Y5I4 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
PCDHAC2Q9Y5I4 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC22.24■■□□□ 1.15
PCDHAC2Q9Y5I4 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHAC2Q9Y5I4 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHAC2Q9Y5I4 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHAC2Q9Y5I4 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHAC2Q9Y5I4 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
PCDHAC2Q9Y5I4 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHAC2Q9Y5I4 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
PCDHAC2Q9Y5I4 IGHGP-201ENST00000390555 1178 ntBASIC22.24■■□□□ 1.15
PCDHAC2Q9Y5I4 IGHV3-47-201ENST00000425060 335 ntBASIC22.24■■□□□ 1.15
PCDHAC2Q9Y5I4 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC22.24■■□□□ 1.15
PCDHAC2Q9Y5I4 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC22.24■■□□□ 1.15
PCDHAC2Q9Y5I4 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC22.24■■□□□ 1.15
PCDHAC2Q9Y5I4 TEN1-204ENST00000588202 862 ntTSL 3 BASIC22.24■■□□□ 1.15
PCDHAC2Q9Y5I4 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC22.24■■□□□ 1.15
PCDHAC2Q9Y5I4 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHAC2Q9Y5I4 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
PCDHAC2Q9Y5I4 POLI-202ENST00000406285 2030 ntTSL 2 BASIC22.24■■□□□ 1.15
PCDHAC2Q9Y5I4 AC099343.3-201ENST00000605834 2503 ntBASIC22.24■■□□□ 1.15
PCDHAC2Q9Y5I4 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC22.24■■□□□ 1.15
PCDHAC2Q9Y5I4 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHAC2Q9Y5I4 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC22.24■■□□□ 1.15
PCDHAC2Q9Y5I4 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC22.24■■□□□ 1.15
PCDHAC2Q9Y5I4 AC034236.2-201ENST00000606662 1610 ntBASIC22.24■■□□□ 1.15
PCDHAC2Q9Y5I4 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHAC2Q9Y5I4 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
PCDHAC2Q9Y5I4 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHAC2Q9Y5I4 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHAC2Q9Y5I4 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHAC2Q9Y5I4 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC22.23■■□□□ 1.15
PCDHAC2Q9Y5I4 BMF-207ENST00000559701 630 ntTSL 3 BASIC22.23■■□□□ 1.15
PCDHAC2Q9Y5I4 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC22.23■■□□□ 1.15
PCDHAC2Q9Y5I4 GPR32P1-201ENST00000601788 811 ntBASIC22.23■■□□□ 1.15
PCDHAC2Q9Y5I4 AL592071.1-201ENST00000611956 408 ntBASIC22.23■■□□□ 1.15
PCDHAC2Q9Y5I4 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC22.23■■□□□ 1.15
PCDHAC2Q9Y5I4 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
PCDHAC2Q9Y5I4 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHAC2Q9Y5I4 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC22.23■■□□□ 1.15
PCDHAC2Q9Y5I4 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHAC2Q9Y5I4 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHAC2Q9Y5I4 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHAC2Q9Y5I4 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC22.23■■□□□ 1.15
PCDHAC2Q9Y5I4 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHAC2Q9Y5I4 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHAC2Q9Y5I4 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHAC2Q9Y5I4 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC22.23■■□□□ 1.15
PCDHAC2Q9Y5I4 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC22.23■■□□□ 1.15
PCDHAC2Q9Y5I4 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHAC2Q9Y5I4 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC22.22■■□□□ 1.15
PCDHAC2Q9Y5I4 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHAC2Q9Y5I4 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHAC2Q9Y5I4 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC22.22■■□□□ 1.15
PCDHAC2Q9Y5I4 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC22.22■■□□□ 1.15
PCDHAC2Q9Y5I4 DFFB-203ENST00000341385 572 ntTSL 5 BASIC22.22■■□□□ 1.15
PCDHAC2Q9Y5I4 AL022342.1-201ENST00000400363 863 ntBASIC22.22■■□□□ 1.15
PCDHAC2Q9Y5I4 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC22.22■■□□□ 1.15
PCDHAC2Q9Y5I4 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHAC2Q9Y5I4 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC22.22■■□□□ 1.15
PCDHAC2Q9Y5I4 RN7SL606P-201ENST00000472779 293 ntBASIC22.22■■□□□ 1.15
PCDHAC2Q9Y5I4 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC22.22■■□□□ 1.15
PCDHAC2Q9Y5I4 AC090616.6-201ENST00000582640 721 ntBASIC22.22■■□□□ 1.15
PCDHAC2Q9Y5I4 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC22.22■■□□□ 1.15
PCDHAC2Q9Y5I4 AC124864.1-201ENST00000623408 392 ntBASIC22.22■■□□□ 1.15
PCDHAC2Q9Y5I4 AC068587.9-201ENST00000641814 219 ntBASIC22.22■■□□□ 1.15
PCDHAC2Q9Y5I4 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHAC2Q9Y5I4 AFG3L1P-217ENST00000557444 2447 ntBASIC22.22■■□□□ 1.15
PCDHAC2Q9Y5I4 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHAC2Q9Y5I4 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHAC2Q9Y5I4 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHAC2Q9Y5I4 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHAC2Q9Y5I4 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHAC2Q9Y5I4 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHAC2Q9Y5I4 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHAC2Q9Y5I4 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC22.21■■□□□ 1.15
PCDHAC2Q9Y5I4 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC22.21■■□□□ 1.15
PCDHAC2Q9Y5I4 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHAC2Q9Y5I4 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHAC2Q9Y5I4 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC22.21■■□□□ 1.15
PCDHAC2Q9Y5I4 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC22.21■■□□□ 1.15
PCDHAC2Q9Y5I4 TSPY12P-201ENST00000421279 868 ntBASIC22.21■■□□□ 1.15
PCDHAC2Q9Y5I4 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC22.21■■□□□ 1.15
PCDHAC2Q9Y5I4 AC079776.4-201ENST00000511039 504 ntBASIC22.21■■□□□ 1.15
PCDHAC2Q9Y5I4 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC22.21■■□□□ 1.15
PCDHAC2Q9Y5I4 ABR-204ENST00000543210 1049 ntTSL 2 BASIC22.21■■□□□ 1.15
PCDHAC2Q9Y5I4 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC22.21■■□□□ 1.15
PCDHAC2Q9Y5I4 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
PCDHAC2Q9Y5I4 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHAC2Q9Y5I4 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHAC2Q9Y5I4 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHAC2Q9Y5I4 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHAC2Q9Y5I4 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHAC2Q9Y5I4 CYP51A1P1-201ENST00000492267 1507 ntBASIC22.21■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms