Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHB7Q9Y5E2 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
PCDHB7Q9Y5E2 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDHB7Q9Y5E2 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHB7Q9Y5E2 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.12■□□□□ 0.81
PCDHB7Q9Y5E2 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.12■□□□□ 0.81
PCDHB7Q9Y5E2 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.12■□□□□ 0.81
PCDHB7Q9Y5E2 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHB7Q9Y5E2 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.12■□□□□ 0.81
PCDHB7Q9Y5E2 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHB7Q9Y5E2 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC20.12■□□□□ 0.81
PCDHB7Q9Y5E2 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHB7Q9Y5E2 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHB7Q9Y5E2 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.12■□□□□ 0.81
PCDHB7Q9Y5E2 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHB7Q9Y5E2 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHB7Q9Y5E2 TSPY19P-201ENST00000418461 509 ntBASIC20.12■□□□□ 0.81
PCDHB7Q9Y5E2 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC20.12■□□□□ 0.81
PCDHB7Q9Y5E2 TSPY18P-201ENST00000441642 509 ntBASIC20.12■□□□□ 0.81
PCDHB7Q9Y5E2 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC20.12■□□□□ 0.81
PCDHB7Q9Y5E2 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC20.12■□□□□ 0.81
PCDHB7Q9Y5E2 AC091304.2-201ENST00000564639 760 ntBASIC20.12■□□□□ 0.81
PCDHB7Q9Y5E2 AC012615.1-201ENST00000565797 1299 ntBASIC20.12■□□□□ 0.81
PCDHB7Q9Y5E2 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC20.12■□□□□ 0.81
PCDHB7Q9Y5E2 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
PCDHB7Q9Y5E2 LINC01711-201ENST00000598340 967 ntBASIC20.12■□□□□ 0.81
PCDHB7Q9Y5E2 IFNL4P1-201ENST00000607083 540 ntBASIC20.12■□□□□ 0.81
PCDHB7Q9Y5E2 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC20.12■□□□□ 0.81
PCDHB7Q9Y5E2 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHB7Q9Y5E2 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.12■□□□□ 0.81
PCDHB7Q9Y5E2 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHB7Q9Y5E2 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.12■□□□□ 0.81
PCDHB7Q9Y5E2 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHB7Q9Y5E2 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
PCDHB7Q9Y5E2 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
PCDHB7Q9Y5E2 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHB7Q9Y5E2 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.12■□□□□ 0.81
PCDHB7Q9Y5E2 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.12■□□□□ 0.81
PCDHB7Q9Y5E2 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
PCDHB7Q9Y5E2 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
PCDHB7Q9Y5E2 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
PCDHB7Q9Y5E2 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
PCDHB7Q9Y5E2 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHB7Q9Y5E2 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
PCDHB7Q9Y5E2 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHB7Q9Y5E2 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC20.11■□□□□ 0.81
PCDHB7Q9Y5E2 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
PCDHB7Q9Y5E2 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHB7Q9Y5E2 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHB7Q9Y5E2 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHB7Q9Y5E2 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC20.11■□□□□ 0.81
PCDHB7Q9Y5E2 FDX1P1-201ENST00000449115 551 ntBASIC20.11■□□□□ 0.81
PCDHB7Q9Y5E2 KRT17P6-201ENST00000453795 1220 ntBASIC20.11■□□□□ 0.81
PCDHB7Q9Y5E2 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC20.11■□□□□ 0.81
PCDHB7Q9Y5E2 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC20.11■□□□□ 0.81
PCDHB7Q9Y5E2 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC20.11■□□□□ 0.81
PCDHB7Q9Y5E2 AL732292.2-201ENST00000609649 430 ntBASIC20.11■□□□□ 0.81
PCDHB7Q9Y5E2 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHB7Q9Y5E2 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHB7Q9Y5E2 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHB7Q9Y5E2 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHB7Q9Y5E2 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHB7Q9Y5E2 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.11■□□□□ 0.81
PCDHB7Q9Y5E2 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHB7Q9Y5E2 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHB7Q9Y5E2 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.1■□□□□ 0.81
PCDHB7Q9Y5E2 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHB7Q9Y5E2 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHB7Q9Y5E2 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHB7Q9Y5E2 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20.1■□□□□ 0.81
PCDHB7Q9Y5E2 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.1■□□□□ 0.81
PCDHB7Q9Y5E2 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHB7Q9Y5E2 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
PCDHB7Q9Y5E2 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHB7Q9Y5E2 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHB7Q9Y5E2 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHB7Q9Y5E2 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC20.1■□□□□ 0.81
PCDHB7Q9Y5E2 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHB7Q9Y5E2 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC20.1■□□□□ 0.81
PCDHB7Q9Y5E2 FOSL1P1-201ENST00000511041 816 ntBASIC20.1■□□□□ 0.81
PCDHB7Q9Y5E2 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC20.1■□□□□ 0.81
PCDHB7Q9Y5E2 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC20.1■□□□□ 0.81
PCDHB7Q9Y5E2 AL390719.2-201ENST00000606993 987 ntBASIC20.1■□□□□ 0.81
PCDHB7Q9Y5E2 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.1■□□□□ 0.81
PCDHB7Q9Y5E2 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHB7Q9Y5E2 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHB7Q9Y5E2 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHB7Q9Y5E2 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.1■□□□□ 0.81
PCDHB7Q9Y5E2 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
PCDHB7Q9Y5E2 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.1■□□□□ 0.81
PCDHB7Q9Y5E2 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHB7Q9Y5E2 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC20.09■□□□□ 0.81
PCDHB7Q9Y5E2 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHB7Q9Y5E2 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.09■□□□□ 0.81
PCDHB7Q9Y5E2 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHB7Q9Y5E2 AC141586.3-201ENST00000562166 1838 ntBASIC20.09■□□□□ 0.81
PCDHB7Q9Y5E2 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
PCDHB7Q9Y5E2 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHB7Q9Y5E2 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.09■□□□□ 0.81
PCDHB7Q9Y5E2 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms