Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP4S1Q9Y587 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
AP4S1Q9Y587 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
AP4S1Q9Y587 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP4S1Q9Y587 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP4S1Q9Y587 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP4S1Q9Y587 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
AP4S1Q9Y587 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
AP4S1Q9Y587 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
AP4S1Q9Y587 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
AP4S1Q9Y587 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
AP4S1Q9Y587 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
AP4S1Q9Y587 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.68■□□□□ 0.42
AP4S1Q9Y587 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
AP4S1Q9Y587 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
AP4S1Q9Y587 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
AP4S1Q9Y587 AP006587.1-201ENST00000534129 1502 ntBASIC17.68■□□□□ 0.42
AP4S1Q9Y587 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
AP4S1Q9Y587 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
AP4S1Q9Y587 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
AP4S1Q9Y587 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
AP4S1Q9Y587 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
AP4S1Q9Y587 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
AP4S1Q9Y587 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
AP4S1Q9Y587 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
AP4S1Q9Y587 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.68■□□□□ 0.42
AP4S1Q9Y587 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
AP4S1Q9Y587 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
AP4S1Q9Y587 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.68■□□□□ 0.42
AP4S1Q9Y587 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.68■□□□□ 0.42
AP4S1Q9Y587 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.68■□□□□ 0.42
AP4S1Q9Y587 AL139246.5-201ENST00000606645 996 ntBASIC17.68■□□□□ 0.42
AP4S1Q9Y587 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
AP4S1Q9Y587 RALB-208ENST00000631312 311 ntTSL 5 BASIC17.68■□□□□ 0.42
AP4S1Q9Y587 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
AP4S1Q9Y587 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
AP4S1Q9Y587 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
AP4S1Q9Y587 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.68■□□□□ 0.42
AP4S1Q9Y587 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
AP4S1Q9Y587 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
AP4S1Q9Y587 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
AP4S1Q9Y587 AL645608.8-201ENST00000606034 2086 ntBASIC17.68■□□□□ 0.42
AP4S1Q9Y587 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.68■□□□□ 0.42
AP4S1Q9Y587 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
AP4S1Q9Y587 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
AP4S1Q9Y587 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
AP4S1Q9Y587 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
AP4S1Q9Y587 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
AP4S1Q9Y587 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.68■□□□□ 0.42
AP4S1Q9Y587 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.68■□□□□ 0.42
AP4S1Q9Y587 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
AP4S1Q9Y587 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
AP4S1Q9Y587 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
AP4S1Q9Y587 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.67■□□□□ 0.42
AP4S1Q9Y587 HEIH-201ENST00000623091 1652 ntBASIC17.67■□□□□ 0.42
AP4S1Q9Y587 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.67■□□□□ 0.42
AP4S1Q9Y587 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP4S1Q9Y587 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
AP4S1Q9Y587 AC093677.2-201ENST00000600169 1863 ntBASIC17.67■□□□□ 0.42
AP4S1Q9Y587 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP4S1Q9Y587 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
AP4S1Q9Y587 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.67■□□□□ 0.42
AP4S1Q9Y587 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.67■□□□□ 0.42
AP4S1Q9Y587 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.67■□□□□ 0.42
AP4S1Q9Y587 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP4S1Q9Y587 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP4S1Q9Y587 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP4S1Q9Y587 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
AP4S1Q9Y587 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
AP4S1Q9Y587 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP4S1Q9Y587 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
AP4S1Q9Y587 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP4S1Q9Y587 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP4S1Q9Y587 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.67■□□□□ 0.42
AP4S1Q9Y587 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC17.67■□□□□ 0.42
AP4S1Q9Y587 AL390719.1-204ENST00000412397 1219 ntBASIC17.67■□□□□ 0.42
AP4S1Q9Y587 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
AP4S1Q9Y587 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.67■□□□□ 0.42
AP4S1Q9Y587 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC17.67■□□□□ 0.42
AP4S1Q9Y587 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP4S1Q9Y587 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC17.67■□□□□ 0.42
AP4S1Q9Y587 BID-214ENST00000617586 542 ntTSL 5 BASIC17.67■□□□□ 0.42
AP4S1Q9Y587 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
AP4S1Q9Y587 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
AP4S1Q9Y587 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.67■□□□□ 0.42
AP4S1Q9Y587 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP4S1Q9Y587 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
AP4S1Q9Y587 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP4S1Q9Y587 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.67■□□□□ 0.42
AP4S1Q9Y587 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP4S1Q9Y587 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.67■□□□□ 0.42
AP4S1Q9Y587 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP4S1Q9Y587 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.66■□□□□ 0.42
AP4S1Q9Y587 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
AP4S1Q9Y587 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP4S1Q9Y587 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP4S1Q9Y587 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
AP4S1Q9Y587 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP4S1Q9Y587 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP4S1Q9Y587 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms