Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00588Q9Y4M8 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00588Q9Y4M8 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00588Q9Y4M8 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00588Q9Y4M8 AC005332.1-201ENST00000577698 1310 ntBASIC12.82□□□□□ -0.36
LINC00588Q9Y4M8 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00588Q9Y4M8 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00588Q9Y4M8 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
LINC00588Q9Y4M8 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC12.82□□□□□ -0.36
LINC00588Q9Y4M8 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00588Q9Y4M8 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00588Q9Y4M8 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00588Q9Y4M8 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00588Q9Y4M8 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
LINC00588Q9Y4M8 IER3-202ENST00000376377 1350 ntBASIC12.81□□□□□ -0.36
LINC00588Q9Y4M8 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00588Q9Y4M8 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00588Q9Y4M8 AL161938.1-201ENST00000569833 2180 ntBASIC12.81□□□□□ -0.36
LINC00588Q9Y4M8 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC12.81□□□□□ -0.36
LINC00588Q9Y4M8 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00588Q9Y4M8 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
LINC00588Q9Y4M8 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC12.81□□□□□ -0.36
LINC00588Q9Y4M8 KRT8P7-201ENST00000533003 1432 ntBASIC12.81□□□□□ -0.36
LINC00588Q9Y4M8 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
LINC00588Q9Y4M8 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00588Q9Y4M8 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00588Q9Y4M8 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00588Q9Y4M8 AC116562.4-201ENST00000641316 2276 ntBASIC12.81□□□□□ -0.36
LINC00588Q9Y4M8 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00588Q9Y4M8 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00588Q9Y4M8 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00588Q9Y4M8 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC12.81□□□□□ -0.36
LINC00588Q9Y4M8 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00588Q9Y4M8 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00588Q9Y4M8 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00588Q9Y4M8 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00588Q9Y4M8 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00588Q9Y4M8 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00588Q9Y4M8 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00588Q9Y4M8 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC12.81□□□□□ -0.36
LINC00588Q9Y4M8 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC12.81□□□□□ -0.36
LINC00588Q9Y4M8 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC12.81□□□□□ -0.36
LINC00588Q9Y4M8 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC12.81□□□□□ -0.36
LINC00588Q9Y4M8 AL136038.3-201ENST00000561909 1096 ntBASIC12.81□□□□□ -0.36
LINC00588Q9Y4M8 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
LINC00588Q9Y4M8 AC068587.9-201ENST00000641814 219 ntBASIC12.81□□□□□ -0.36
LINC00588Q9Y4M8 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00588Q9Y4M8 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00588Q9Y4M8 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00588Q9Y4M8 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00588Q9Y4M8 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC12.81□□□□□ -0.36
LINC00588Q9Y4M8 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC12.81□□□□□ -0.36
LINC00588Q9Y4M8 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00588Q9Y4M8 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00588Q9Y4M8 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC12.81□□□□□ -0.36
LINC00588Q9Y4M8 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00588Q9Y4M8 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC12.81□□□□□ -0.36
LINC00588Q9Y4M8 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00588Q9Y4M8 AC034236.2-201ENST00000606662 1610 ntBASIC12.8□□□□□ -0.36
LINC00588Q9Y4M8 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC12.8□□□□□ -0.36
LINC00588Q9Y4M8 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00588Q9Y4M8 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00588Q9Y4M8 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC12.8□□□□□ -0.36
LINC00588Q9Y4M8 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC12.8□□□□□ -0.36
LINC00588Q9Y4M8 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC12.8□□□□□ -0.36
LINC00588Q9Y4M8 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC12.8□□□□□ -0.36
LINC00588Q9Y4M8 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC12.8□□□□□ -0.36
LINC00588Q9Y4M8 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00588Q9Y4M8 HBZP1-201ENST00000354915 429 ntBASIC12.8□□□□□ -0.36
LINC00588Q9Y4M8 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00588Q9Y4M8 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC12.8□□□□□ -0.36
LINC00588Q9Y4M8 AC092597.1-201ENST00000487352 616 ntBASIC12.8□□□□□ -0.36
LINC00588Q9Y4M8 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00588Q9Y4M8 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC12.8□□□□□ -0.36
LINC00588Q9Y4M8 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC12.8□□□□□ -0.36
LINC00588Q9Y4M8 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC12.8□□□□□ -0.36
LINC00588Q9Y4M8 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
LINC00588Q9Y4M8 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00588Q9Y4M8 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC12.8□□□□□ -0.36
LINC00588Q9Y4M8 AL157888.1-201ENST00000631930 593 ntBASIC12.8□□□□□ -0.36
LINC00588Q9Y4M8 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC12.8□□□□□ -0.36
LINC00588Q9Y4M8 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00588Q9Y4M8 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00588Q9Y4M8 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC12.8□□□□□ -0.36
LINC00588Q9Y4M8 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00588Q9Y4M8 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
LINC00588Q9Y4M8 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00588Q9Y4M8 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00588Q9Y4M8 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00588Q9Y4M8 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00588Q9Y4M8 HOXB1-202ENST00000577092 1414 ntBASIC12.79□□□□□ -0.36
LINC00588Q9Y4M8 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00588Q9Y4M8 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC12.79□□□□□ -0.36
LINC00588Q9Y4M8 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
LINC00588Q9Y4M8 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
LINC00588Q9Y4M8 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00588Q9Y4M8 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00588Q9Y4M8 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC12.79□□□□□ -0.36
LINC00588Q9Y4M8 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
LINC00588Q9Y4M8 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms