Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RHBDD3Q9Y3P4 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RHBDD3Q9Y3P4 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RHBDD3Q9Y3P4 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.41■□□□□ 0.22
RHBDD3Q9Y3P4 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RHBDD3Q9Y3P4 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
RHBDD3Q9Y3P4 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.41■□□□□ 0.22
RHBDD3Q9Y3P4 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.41■□□□□ 0.22
RHBDD3Q9Y3P4 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RHBDD3Q9Y3P4 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RHBDD3Q9Y3P4 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RHBDD3Q9Y3P4 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RHBDD3Q9Y3P4 AP002982.1-201ENST00000492365 877 ntBASIC16.41■□□□□ 0.22
RHBDD3Q9Y3P4 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
RHBDD3Q9Y3P4 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.41■□□□□ 0.22
RHBDD3Q9Y3P4 AL445675.2-201ENST00000620291 557 ntBASIC16.41■□□□□ 0.22
RHBDD3Q9Y3P4 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.41■□□□□ 0.22
RHBDD3Q9Y3P4 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
RHBDD3Q9Y3P4 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
RHBDD3Q9Y3P4 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RHBDD3Q9Y3P4 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.41■□□□□ 0.22
RHBDD3Q9Y3P4 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RHBDD3Q9Y3P4 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.41■□□□□ 0.22
RHBDD3Q9Y3P4 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.41■□□□□ 0.22
RHBDD3Q9Y3P4 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
RHBDD3Q9Y3P4 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC16.41■□□□□ 0.22
RHBDD3Q9Y3P4 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.41■□□□□ 0.22
RHBDD3Q9Y3P4 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RHBDD3Q9Y3P4 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.41■□□□□ 0.22
RHBDD3Q9Y3P4 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
RHBDD3Q9Y3P4 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RHBDD3Q9Y3P4 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.4■□□□□ 0.22
RHBDD3Q9Y3P4 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.4■□□□□ 0.22
RHBDD3Q9Y3P4 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.4■□□□□ 0.22
RHBDD3Q9Y3P4 KRT8P41-201ENST00000533985 1514 ntBASIC16.4■□□□□ 0.22
RHBDD3Q9Y3P4 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RHBDD3Q9Y3P4 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RHBDD3Q9Y3P4 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RHBDD3Q9Y3P4 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RHBDD3Q9Y3P4 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RHBDD3Q9Y3P4 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RHBDD3Q9Y3P4 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RHBDD3Q9Y3P4 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RHBDD3Q9Y3P4 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
RHBDD3Q9Y3P4 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.4■□□□□ 0.22
RHBDD3Q9Y3P4 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
RHBDD3Q9Y3P4 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RHBDD3Q9Y3P4 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RHBDD3Q9Y3P4 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RHBDD3Q9Y3P4 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RHBDD3Q9Y3P4 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RHBDD3Q9Y3P4 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.4■□□□□ 0.22
RHBDD3Q9Y3P4 NIFKP9-201ENST00000419265 221 ntBASIC16.4■□□□□ 0.22
RHBDD3Q9Y3P4 TSPY21P-201ENST00000433481 731 ntBASIC16.4■□□□□ 0.22
RHBDD3Q9Y3P4 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RHBDD3Q9Y3P4 Z85996.1-201ENST00000494644 937 ntBASIC16.4■□□□□ 0.22
RHBDD3Q9Y3P4 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC16.4■□□□□ 0.22
RHBDD3Q9Y3P4 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC16.4■□□□□ 0.22
RHBDD3Q9Y3P4 FAM197Y4-202ENST00000622692 608 ntBASIC16.4■□□□□ 0.22
RHBDD3Q9Y3P4 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RHBDD3Q9Y3P4 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC16.4■□□□□ 0.22
RHBDD3Q9Y3P4 OR6D1P-202ENST00000641007 5290 ntBASIC16.4■□□□□ 0.22
RHBDD3Q9Y3P4 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.4■□□□□ 0.22
RHBDD3Q9Y3P4 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RHBDD3Q9Y3P4 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.4■□□□□ 0.22
RHBDD3Q9Y3P4 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RHBDD3Q9Y3P4 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RHBDD3Q9Y3P4 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RHBDD3Q9Y3P4 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
RHBDD3Q9Y3P4 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
RHBDD3Q9Y3P4 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RHBDD3Q9Y3P4 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RHBDD3Q9Y3P4 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RHBDD3Q9Y3P4 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.4■□□□□ 0.22
RHBDD3Q9Y3P4 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RHBDD3Q9Y3P4 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RHBDD3Q9Y3P4 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
RHBDD3Q9Y3P4 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RHBDD3Q9Y3P4 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
RHBDD3Q9Y3P4 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
RHBDD3Q9Y3P4 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RHBDD3Q9Y3P4 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.39■□□□□ 0.21
RHBDD3Q9Y3P4 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RHBDD3Q9Y3P4 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RHBDD3Q9Y3P4 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.39■□□□□ 0.21
RHBDD3Q9Y3P4 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
RHBDD3Q9Y3P4 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RHBDD3Q9Y3P4 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RHBDD3Q9Y3P4 TSPY23P-201ENST00000440136 739 ntBASIC16.39■□□□□ 0.21
RHBDD3Q9Y3P4 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RHBDD3Q9Y3P4 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.39■□□□□ 0.21
RHBDD3Q9Y3P4 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RHBDD3Q9Y3P4 RPS2P4-201ENST00000476944 856 ntBASIC16.39■□□□□ 0.21
RHBDD3Q9Y3P4 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC16.39■□□□□ 0.21
RHBDD3Q9Y3P4 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.39■□□□□ 0.21
RHBDD3Q9Y3P4 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
RHBDD3Q9Y3P4 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC16.39■□□□□ 0.21
RHBDD3Q9Y3P4 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
RHBDD3Q9Y3P4 AL359736.2-201ENST00000621992 437 ntBASIC16.39■□□□□ 0.21
RHBDD3Q9Y3P4 AC131212.4-201ENST00000623606 975 ntBASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms