Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC25.57■■□□□ 1.68
NINLQ9Y2I6 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
NINLQ9Y2I6 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC25.57■■□□□ 1.68
NINLQ9Y2I6 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
NINLQ9Y2I6 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
NINLQ9Y2I6 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
NINLQ9Y2I6 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
NINLQ9Y2I6 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC25.56■■□□□ 1.68
NINLQ9Y2I6 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC25.56■■□□□ 1.68
NINLQ9Y2I6 LITAF-220ENST00000620789 692 ntTSL 5 BASIC25.56■■□□□ 1.68
NINLQ9Y2I6 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
NINLQ9Y2I6 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
NINLQ9Y2I6 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
NINLQ9Y2I6 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
NINLQ9Y2I6 AL357033.4-201ENST00000617703 1807 ntBASIC25.56■■□□□ 1.68
NINLQ9Y2I6 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC25.56■■□□□ 1.68
NINLQ9Y2I6 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC25.56■■□□□ 1.68
NINLQ9Y2I6 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
NINLQ9Y2I6 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
NINLQ9Y2I6 AC007952.6-201ENST00000573168 2673 ntBASIC25.56■■□□□ 1.68
NINLQ9Y2I6 AC003957.1-201ENST00000625108 2673 ntBASIC25.56■■□□□ 1.68
NINLQ9Y2I6 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
NINLQ9Y2I6 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
NINLQ9Y2I6 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC25.56■■□□□ 1.68
NINLQ9Y2I6 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
NINLQ9Y2I6 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC25.56■■□□□ 1.68
NINLQ9Y2I6 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC25.56■■□□□ 1.68
NINLQ9Y2I6 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC25.56■■□□□ 1.68
NINLQ9Y2I6 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
NINLQ9Y2I6 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
NINLQ9Y2I6 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC25.55■■□□□ 1.68
NINLQ9Y2I6 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
NINLQ9Y2I6 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC25.55■■□□□ 1.68
NINLQ9Y2I6 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC25.55■■□□□ 1.68
NINLQ9Y2I6 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
NINLQ9Y2I6 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC25.55■■□□□ 1.68
NINLQ9Y2I6 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC25.55■■□□□ 1.68
NINLQ9Y2I6 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
NINLQ9Y2I6 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
NINLQ9Y2I6 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC25.55■■□□□ 1.68
NINLQ9Y2I6 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
NINLQ9Y2I6 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
NINLQ9Y2I6 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC25.55■■□□□ 1.68
NINLQ9Y2I6 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC25.55■■□□□ 1.68
NINLQ9Y2I6 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC25.55■■□□□ 1.68
NINLQ9Y2I6 KLK8-205ENST00000593490 267 ntTSL 3 BASIC25.55■■□□□ 1.68
NINLQ9Y2I6 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
NINLQ9Y2I6 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC25.55■■□□□ 1.68
NINLQ9Y2I6 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
NINLQ9Y2I6 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
NINLQ9Y2I6 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
NINLQ9Y2I6 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
NINLQ9Y2I6 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
NINLQ9Y2I6 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC25.54■■□□□ 1.68
NINLQ9Y2I6 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
NINLQ9Y2I6 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC25.54■■□□□ 1.68
NINLQ9Y2I6 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
NINLQ9Y2I6 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
NINLQ9Y2I6 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
NINLQ9Y2I6 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
NINLQ9Y2I6 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
NINLQ9Y2I6 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
NINLQ9Y2I6 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
NINLQ9Y2I6 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
NINLQ9Y2I6 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
NINLQ9Y2I6 FDX1P1-201ENST00000449115 551 ntBASIC25.54■■□□□ 1.68
NINLQ9Y2I6 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC25.54■■□□□ 1.68
NINLQ9Y2I6 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC25.54■■□□□ 1.68
NINLQ9Y2I6 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
NINLQ9Y2I6 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC25.54■■□□□ 1.68
NINLQ9Y2I6 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC25.54■■□□□ 1.68
NINLQ9Y2I6 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
NINLQ9Y2I6 AL121672.3-201ENST00000608644 468 ntBASIC25.54■■□□□ 1.68
NINLQ9Y2I6 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
NINLQ9Y2I6 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
NINLQ9Y2I6 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
NINLQ9Y2I6 BCL10-202ENST00000620248 774 ntTSL 5 BASIC25.54■■□□□ 1.68
NINLQ9Y2I6 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC25.54■■□□□ 1.68
NINLQ9Y2I6 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC25.54■■□□□ 1.68
NINLQ9Y2I6 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC25.53■■□□□ 1.68
NINLQ9Y2I6 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
NINLQ9Y2I6 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
NINLQ9Y2I6 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
NINLQ9Y2I6 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
NINLQ9Y2I6 PBK-203ENST00000522944 1499 ntTSL 2 BASIC25.53■■□□□ 1.68
NINLQ9Y2I6 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
NINLQ9Y2I6 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC25.53■■□□□ 1.68
NINLQ9Y2I6 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
NINLQ9Y2I6 BAALC-202ENST00000306391 243 ntTSL 5 BASIC25.53■■□□□ 1.68
NINLQ9Y2I6 BAALC-204ENST00000330955 222 ntTSL 5 BASIC25.53■■□□□ 1.68
NINLQ9Y2I6 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC25.53■■□□□ 1.68
NINLQ9Y2I6 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC25.53■■□□□ 1.68
NINLQ9Y2I6 TEN1-204ENST00000588202 862 ntTSL 3 BASIC25.53■■□□□ 1.68
NINLQ9Y2I6 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC25.53■■□□□ 1.68
NINLQ9Y2I6 IRF5-214ENST00000613821 595 ntTSL 5 BASIC25.53■■□□□ 1.68
NINLQ9Y2I6 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
NINLQ9Y2I6 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC25.52■■□□□ 1.68
NINLQ9Y2I6 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC25.52■■□□□ 1.68
NINLQ9Y2I6 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
NINLQ9Y2I6 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms