Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
CHMP2BQ9UQN3 KRT16P5-201ENST00000455284 522 ntBASIC19.07■□□□□ 0.64
CHMP2BQ9UQN3 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CHMP2BQ9UQN3 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.07■□□□□ 0.64
CHMP2BQ9UQN3 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CHMP2BQ9UQN3 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.07■□□□□ 0.64
CHMP2BQ9UQN3 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHMP2BQ9UQN3 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.07■□□□□ 0.64
CHMP2BQ9UQN3 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CHMP2BQ9UQN3 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHMP2BQ9UQN3 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CHMP2BQ9UQN3 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
CHMP2BQ9UQN3 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHMP2BQ9UQN3 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHMP2BQ9UQN3 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.07■□□□□ 0.64
CHMP2BQ9UQN3 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHMP2BQ9UQN3 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.07■□□□□ 0.64
CHMP2BQ9UQN3 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHMP2BQ9UQN3 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
CHMP2BQ9UQN3 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHMP2BQ9UQN3 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CHMP2BQ9UQN3 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
CHMP2BQ9UQN3 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHMP2BQ9UQN3 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHMP2BQ9UQN3 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHMP2BQ9UQN3 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CHMP2BQ9UQN3 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.06■□□□□ 0.64
CHMP2BQ9UQN3 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHMP2BQ9UQN3 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CHMP2BQ9UQN3 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHMP2BQ9UQN3 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHMP2BQ9UQN3 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.06■□□□□ 0.64
CHMP2BQ9UQN3 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.06■□□□□ 0.64
CHMP2BQ9UQN3 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.06■□□□□ 0.64
CHMP2BQ9UQN3 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
CHMP2BQ9UQN3 AC068587.9-201ENST00000641814 219 ntBASIC19.06■□□□□ 0.64
CHMP2BQ9UQN3 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.06■□□□□ 0.64
CHMP2BQ9UQN3 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CHMP2BQ9UQN3 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHMP2BQ9UQN3 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHMP2BQ9UQN3 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CHMP2BQ9UQN3 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHMP2BQ9UQN3 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHMP2BQ9UQN3 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CHMP2BQ9UQN3 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHMP2BQ9UQN3 NOC2LP2-201ENST00000407594 1944 ntBASIC19.06■□□□□ 0.64
CHMP2BQ9UQN3 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHMP2BQ9UQN3 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.06■□□□□ 0.64
CHMP2BQ9UQN3 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHMP2BQ9UQN3 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHMP2BQ9UQN3 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHMP2BQ9UQN3 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.05■□□□□ 0.64
CHMP2BQ9UQN3 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHMP2BQ9UQN3 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHMP2BQ9UQN3 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHMP2BQ9UQN3 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHMP2BQ9UQN3 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHMP2BQ9UQN3 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHMP2BQ9UQN3 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHMP2BQ9UQN3 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.05■□□□□ 0.64
CHMP2BQ9UQN3 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.05■□□□□ 0.64
CHMP2BQ9UQN3 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
CHMP2BQ9UQN3 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.05■□□□□ 0.64
CHMP2BQ9UQN3 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.05■□□□□ 0.64
CHMP2BQ9UQN3 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.05■□□□□ 0.64
CHMP2BQ9UQN3 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHMP2BQ9UQN3 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.05■□□□□ 0.64
CHMP2BQ9UQN3 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.05■□□□□ 0.64
CHMP2BQ9UQN3 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
CHMP2BQ9UQN3 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CHMP2BQ9UQN3 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHMP2BQ9UQN3 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
CHMP2BQ9UQN3 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHMP2BQ9UQN3 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CHMP2BQ9UQN3 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.05■□□□□ 0.64
CHMP2BQ9UQN3 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHMP2BQ9UQN3 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHMP2BQ9UQN3 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHMP2BQ9UQN3 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHMP2BQ9UQN3 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.04■□□□□ 0.64
CHMP2BQ9UQN3 AC068880.1-201ENST00000507289 2297 ntBASIC19.04■□□□□ 0.64
CHMP2BQ9UQN3 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHMP2BQ9UQN3 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
CHMP2BQ9UQN3 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CHMP2BQ9UQN3 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHMP2BQ9UQN3 PCDHB18P-201ENST00000524813 2368 ntBASIC19.04■□□□□ 0.64
CHMP2BQ9UQN3 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHMP2BQ9UQN3 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHMP2BQ9UQN3 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.04■□□□□ 0.64
CHMP2BQ9UQN3 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHMP2BQ9UQN3 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHMP2BQ9UQN3 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHMP2BQ9UQN3 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHMP2BQ9UQN3 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.04■□□□□ 0.64
CHMP2BQ9UQN3 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.04■□□□□ 0.64
CHMP2BQ9UQN3 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.04■□□□□ 0.64
CHMP2BQ9UQN3 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.04■□□□□ 0.64
CHMP2BQ9UQN3 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
CHMP2BQ9UQN3 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
CHMP2BQ9UQN3 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms