Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
UBQLN1Q9UMX0 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
UBQLN1Q9UMX0 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
UBQLN1Q9UMX0 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
UBQLN1Q9UMX0 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC20.07■□□□□ 0.8
UBQLN1Q9UMX0 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
UBQLN1Q9UMX0 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
UBQLN1Q9UMX0 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.07■□□□□ 0.8
UBQLN1Q9UMX0 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
UBQLN1Q9UMX0 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
UBQLN1Q9UMX0 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
UBQLN1Q9UMX0 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.07■□□□□ 0.8
UBQLN1Q9UMX0 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
UBQLN1Q9UMX0 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
UBQLN1Q9UMX0 ISCU-203ENST00000431221 799 ntTSL 2 BASIC20.07■□□□□ 0.8
UBQLN1Q9UMX0 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC20.07■□□□□ 0.8
UBQLN1Q9UMX0 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC20.07■□□□□ 0.8
UBQLN1Q9UMX0 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC20.07■□□□□ 0.8
UBQLN1Q9UMX0 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
UBQLN1Q9UMX0 HYMAI.1-201ENST00000620949 238 ntBASIC20.07■□□□□ 0.8
UBQLN1Q9UMX0 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC20.07■□□□□ 0.8
UBQLN1Q9UMX0 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
UBQLN1Q9UMX0 DFFB-212ENST00000625756 649 ntTSL 5 BASIC20.07■□□□□ 0.8
UBQLN1Q9UMX0 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
UBQLN1Q9UMX0 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC20.07■□□□□ 0.8
UBQLN1Q9UMX0 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.07■□□□□ 0.8
UBQLN1Q9UMX0 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
UBQLN1Q9UMX0 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.07■□□□□ 0.8
UBQLN1Q9UMX0 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.07■□□□□ 0.8
UBQLN1Q9UMX0 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
UBQLN1Q9UMX0 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
UBQLN1Q9UMX0 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
UBQLN1Q9UMX0 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.07■□□□□ 0.8
UBQLN1Q9UMX0 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.06■□□□□ 0.8
UBQLN1Q9UMX0 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
UBQLN1Q9UMX0 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
UBQLN1Q9UMX0 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC20.06■□□□□ 0.8
UBQLN1Q9UMX0 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
UBQLN1Q9UMX0 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
UBQLN1Q9UMX0 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
UBQLN1Q9UMX0 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
UBQLN1Q9UMX0 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.06■□□□□ 0.8
UBQLN1Q9UMX0 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
UBQLN1Q9UMX0 DAP-202ENST00000432074 1048 ntTSL 2 BASIC20.06■□□□□ 0.8
UBQLN1Q9UMX0 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC20.06■□□□□ 0.8
UBQLN1Q9UMX0 LY6E-213ENST00000522528 606 ntTSL 3 BASIC20.06■□□□□ 0.8
UBQLN1Q9UMX0 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC20.06■□□□□ 0.8
UBQLN1Q9UMX0 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
UBQLN1Q9UMX0 FGF14-AS2-201ENST00000606448 1074 ntBASIC20.06■□□□□ 0.8
UBQLN1Q9UMX0 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
UBQLN1Q9UMX0 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
UBQLN1Q9UMX0 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
UBQLN1Q9UMX0 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
UBQLN1Q9UMX0 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
UBQLN1Q9UMX0 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC20.06■□□□□ 0.8
UBQLN1Q9UMX0 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.05■□□□□ 0.8
UBQLN1Q9UMX0 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBQLN1Q9UMX0 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
UBQLN1Q9UMX0 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBQLN1Q9UMX0 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
UBQLN1Q9UMX0 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.05■□□□□ 0.8
UBQLN1Q9UMX0 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBQLN1Q9UMX0 LINC01311-201ENST00000565162 1445 ntBASIC20.05■□□□□ 0.8
UBQLN1Q9UMX0 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBQLN1Q9UMX0 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
UBQLN1Q9UMX0 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBQLN1Q9UMX0 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBQLN1Q9UMX0 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBQLN1Q9UMX0 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBQLN1Q9UMX0 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC20.05■□□□□ 0.8
UBQLN1Q9UMX0 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC20.05■□□□□ 0.8
UBQLN1Q9UMX0 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBQLN1Q9UMX0 AC010240.3-201ENST00000607688 395 ntBASIC20.05■□□□□ 0.8
UBQLN1Q9UMX0 AC083849.1-201ENST00000615227 514 ntBASIC20.05■□□□□ 0.8
UBQLN1Q9UMX0 AL157888.1-201ENST00000631930 593 ntBASIC20.05■□□□□ 0.8
UBQLN1Q9UMX0 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBQLN1Q9UMX0 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBQLN1Q9UMX0 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
UBQLN1Q9UMX0 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
UBQLN1Q9UMX0 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
UBQLN1Q9UMX0 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
UBQLN1Q9UMX0 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
UBQLN1Q9UMX0 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
UBQLN1Q9UMX0 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
UBQLN1Q9UMX0 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
UBQLN1Q9UMX0 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC20.04■□□□□ 0.8
UBQLN1Q9UMX0 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
UBQLN1Q9UMX0 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.04■□□□□ 0.8
UBQLN1Q9UMX0 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
UBQLN1Q9UMX0 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
UBQLN1Q9UMX0 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.04■□□□□ 0.8
UBQLN1Q9UMX0 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.04■□□□□ 0.8
UBQLN1Q9UMX0 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
UBQLN1Q9UMX0 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC20.04■□□□□ 0.8
UBQLN1Q9UMX0 CD320-202ENST00000537716 1119 ntTSL 2 BASIC20.04■□□□□ 0.8
UBQLN1Q9UMX0 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
UBQLN1Q9UMX0 ZNF444P1-201ENST00000559497 298 ntBASIC20.04■□□□□ 0.8
UBQLN1Q9UMX0 MIR3180-4-201ENST00000582223 153 ntBASIC20.04■□□□□ 0.8
UBQLN1Q9UMX0 DBP-204ENST00000599385 709 ntTSL 3 BASIC20.04■□□□□ 0.8
UBQLN1Q9UMX0 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms