Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.71■□□□□ 0.75
SMARCAL1Q9NZC9 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.71■□□□□ 0.75
SMARCAL1Q9NZC9 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMARCAL1Q9NZC9 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.71■□□□□ 0.75
SMARCAL1Q9NZC9 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.71■□□□□ 0.75
SMARCAL1Q9NZC9 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.71■□□□□ 0.75
SMARCAL1Q9NZC9 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.71■□□□□ 0.75
SMARCAL1Q9NZC9 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.71■□□□□ 0.75
SMARCAL1Q9NZC9 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.71■□□□□ 0.75
SMARCAL1Q9NZC9 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
SMARCAL1Q9NZC9 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
SMARCAL1Q9NZC9 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMARCAL1Q9NZC9 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.71■□□□□ 0.75
SMARCAL1Q9NZC9 AL160286.2-201ENST00000567150 934 ntBASIC19.71■□□□□ 0.75
SMARCAL1Q9NZC9 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.71■□□□□ 0.75
SMARCAL1Q9NZC9 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
SMARCAL1Q9NZC9 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.71■□□□□ 0.75
SMARCAL1Q9NZC9 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMARCAL1Q9NZC9 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
SMARCAL1Q9NZC9 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
SMARCAL1Q9NZC9 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SMARCAL1Q9NZC9 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
SMARCAL1Q9NZC9 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMARCAL1Q9NZC9 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
SMARCAL1Q9NZC9 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMARCAL1Q9NZC9 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SMARCAL1Q9NZC9 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMARCAL1Q9NZC9 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.71■□□□□ 0.75
SMARCAL1Q9NZC9 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
SMARCAL1Q9NZC9 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMARCAL1Q9NZC9 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
SMARCAL1Q9NZC9 AL162741.1-201ENST00000565563 1558 ntBASIC19.7■□□□□ 0.74
SMARCAL1Q9NZC9 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMARCAL1Q9NZC9 AC106820.2-201ENST00000563775 3264 ntBASIC19.7■□□□□ 0.74
SMARCAL1Q9NZC9 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.7■□□□□ 0.74
SMARCAL1Q9NZC9 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SMARCAL1Q9NZC9 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SMARCAL1Q9NZC9 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC19.7■□□□□ 0.74
SMARCAL1Q9NZC9 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMARCAL1Q9NZC9 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SMARCAL1Q9NZC9 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMARCAL1Q9NZC9 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMARCAL1Q9NZC9 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMARCAL1Q9NZC9 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
SMARCAL1Q9NZC9 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
SMARCAL1Q9NZC9 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.7■□□□□ 0.74
SMARCAL1Q9NZC9 RNA5SP413-201ENST00000516373 109 ntBASIC19.7■□□□□ 0.74
SMARCAL1Q9NZC9 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
SMARCAL1Q9NZC9 AC008687.6-201ENST00000596318 630 ntBASIC19.7■□□□□ 0.74
SMARCAL1Q9NZC9 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
SMARCAL1Q9NZC9 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMARCAL1Q9NZC9 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMARCAL1Q9NZC9 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.7■□□□□ 0.74
SMARCAL1Q9NZC9 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
SMARCAL1Q9NZC9 KRT8P41-201ENST00000533985 1514 ntBASIC19.7■□□□□ 0.74
SMARCAL1Q9NZC9 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMARCAL1Q9NZC9 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SMARCAL1Q9NZC9 AC134043.2-201ENST00000624206 2238 ntBASIC19.7■□□□□ 0.74
SMARCAL1Q9NZC9 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMARCAL1Q9NZC9 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.69■□□□□ 0.74
SMARCAL1Q9NZC9 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMARCAL1Q9NZC9 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.69■□□□□ 0.74
SMARCAL1Q9NZC9 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
SMARCAL1Q9NZC9 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.69■□□□□ 0.74
SMARCAL1Q9NZC9 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SMARCAL1Q9NZC9 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.69■□□□□ 0.74
SMARCAL1Q9NZC9 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.69■□□□□ 0.74
SMARCAL1Q9NZC9 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMARCAL1Q9NZC9 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMARCAL1Q9NZC9 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.69■□□□□ 0.74
SMARCAL1Q9NZC9 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.69■□□□□ 0.74
SMARCAL1Q9NZC9 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.69■□□□□ 0.74
SMARCAL1Q9NZC9 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMARCAL1Q9NZC9 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC19.69■□□□□ 0.74
SMARCAL1Q9NZC9 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.69■□□□□ 0.74
SMARCAL1Q9NZC9 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SMARCAL1Q9NZC9 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.69■□□□□ 0.74
SMARCAL1Q9NZC9 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
SMARCAL1Q9NZC9 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMARCAL1Q9NZC9 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SMARCAL1Q9NZC9 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMARCAL1Q9NZC9 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
SMARCAL1Q9NZC9 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.68■□□□□ 0.74
SMARCAL1Q9NZC9 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.68■□□□□ 0.74
SMARCAL1Q9NZC9 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.68■□□□□ 0.74
SMARCAL1Q9NZC9 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
SMARCAL1Q9NZC9 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SMARCAL1Q9NZC9 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMARCAL1Q9NZC9 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SMARCAL1Q9NZC9 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.68■□□□□ 0.74
SMARCAL1Q9NZC9 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMARCAL1Q9NZC9 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.68■□□□□ 0.74
SMARCAL1Q9NZC9 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMARCAL1Q9NZC9 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SMARCAL1Q9NZC9 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
SMARCAL1Q9NZC9 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMARCAL1Q9NZC9 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMARCAL1Q9NZC9 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMARCAL1Q9NZC9 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.68■□□□□ 0.74
SMARCAL1Q9NZC9 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms