Protein–RNA interactions for Protein: Q9NYX4

CALY, Neuron-specific vesicular protein calcyon, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALYQ9NYX4 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC15.5■□□□□ 0.07
CALYQ9NYX4 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CALYQ9NYX4 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CALYQ9NYX4 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CALYQ9NYX4 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC15.5■□□□□ 0.07
CALYQ9NYX4 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CALYQ9NYX4 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CALYQ9NYX4 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CALYQ9NYX4 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CALYQ9NYX4 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC15.5■□□□□ 0.07
CALYQ9NYX4 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CALYQ9NYX4 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CALYQ9NYX4 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CALYQ9NYX4 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CALYQ9NYX4 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CALYQ9NYX4 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC15.49■□□□□ 0.07
CALYQ9NYX4 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CALYQ9NYX4 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CALYQ9NYX4 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CALYQ9NYX4 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CALYQ9NYX4 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC15.49■□□□□ 0.07
CALYQ9NYX4 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC15.49■□□□□ 0.07
CALYQ9NYX4 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CALYQ9NYX4 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CALYQ9NYX4 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC15.49■□□□□ 0.07
CALYQ9NYX4 UNC93B2-201ENST00000285383 730 ntBASIC15.49■□□□□ 0.07
CALYQ9NYX4 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
CALYQ9NYX4 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC15.49■□□□□ 0.07
CALYQ9NYX4 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CALYQ9NYX4 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CALYQ9NYX4 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CALYQ9NYX4 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC15.49■□□□□ 0.07
CALYQ9NYX4 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CALYQ9NYX4 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC15.49■□□□□ 0.07
CALYQ9NYX4 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CALYQ9NYX4 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC15.49■□□□□ 0.07
CALYQ9NYX4 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC15.49■□□□□ 0.07
CALYQ9NYX4 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC15.49■□□□□ 0.07
CALYQ9NYX4 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CALYQ9NYX4 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CALYQ9NYX4 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CALYQ9NYX4 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CALYQ9NYX4 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CALYQ9NYX4 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC15.49■□□□□ 0.07
CALYQ9NYX4 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC15.49■□□□□ 0.07
CALYQ9NYX4 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CALYQ9NYX4 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CALYQ9NYX4 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CALYQ9NYX4 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC15.49■□□□□ 0.07
CALYQ9NYX4 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CALYQ9NYX4 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CALYQ9NYX4 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC15.49■□□□□ 0.07
CALYQ9NYX4 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CALYQ9NYX4 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
CALYQ9NYX4 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CALYQ9NYX4 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CALYQ9NYX4 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CALYQ9NYX4 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CALYQ9NYX4 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CALYQ9NYX4 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CALYQ9NYX4 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CALYQ9NYX4 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC15.48■□□□□ 0.07
CALYQ9NYX4 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CALYQ9NYX4 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CALYQ9NYX4 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC15.48■□□□□ 0.07
CALYQ9NYX4 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CALYQ9NYX4 BUB3-202ENST00000368859 667 ntTSL 3 BASIC15.48■□□□□ 0.07
CALYQ9NYX4 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
CALYQ9NYX4 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CALYQ9NYX4 RBM17P1-201ENST00000453646 1190 ntBASIC15.48■□□□□ 0.07
CALYQ9NYX4 SNORA78-201ENST00000459373 127 ntBASIC15.48■□□□□ 0.07
CALYQ9NYX4 CA15P1-201ENST00000481698 905 ntBASIC15.48■□□□□ 0.07
CALYQ9NYX4 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC15.48■□□□□ 0.07
CALYQ9NYX4 AP005242.2-201ENST00000580065 1175 ntBASIC15.48■□□□□ 0.07
CALYQ9NYX4 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC15.48■□□□□ 0.07
CALYQ9NYX4 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC15.48■□□□□ 0.07
CALYQ9NYX4 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC15.48■□□□□ 0.07
CALYQ9NYX4 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC15.48■□□□□ 0.07
CALYQ9NYX4 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CALYQ9NYX4 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CALYQ9NYX4 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC15.48■□□□□ 0.07
CALYQ9NYX4 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
CALYQ9NYX4 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CALYQ9NYX4 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC15.48■□□□□ 0.07
CALYQ9NYX4 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CALYQ9NYX4 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CALYQ9NYX4 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CALYQ9NYX4 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CALYQ9NYX4 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC15.48■□□□□ 0.07
CALYQ9NYX4 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CALYQ9NYX4 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CALYQ9NYX4 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CALYQ9NYX4 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CALYQ9NYX4 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CALYQ9NYX4 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC15.48■□□□□ 0.07
CALYQ9NYX4 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CALYQ9NYX4 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CALYQ9NYX4 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CALYQ9NYX4 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CALYQ9NYX4 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms