Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CUEDC1Q9NWM3 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CUEDC1Q9NWM3 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CUEDC1Q9NWM3 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CUEDC1Q9NWM3 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
CUEDC1Q9NWM3 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.09■□□□□ 0.49
CUEDC1Q9NWM3 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CUEDC1Q9NWM3 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.09■□□□□ 0.49
CUEDC1Q9NWM3 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.09■□□□□ 0.49
CUEDC1Q9NWM3 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.09■□□□□ 0.49
CUEDC1Q9NWM3 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CUEDC1Q9NWM3 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
CUEDC1Q9NWM3 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.09■□□□□ 0.49
CUEDC1Q9NWM3 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.09■□□□□ 0.49
CUEDC1Q9NWM3 AC004408.2-201ENST00000623613 2777 ntBASIC18.09■□□□□ 0.49
CUEDC1Q9NWM3 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.09■□□□□ 0.49
CUEDC1Q9NWM3 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CUEDC1Q9NWM3 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CUEDC1Q9NWM3 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CUEDC1Q9NWM3 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.09■□□□□ 0.49
CUEDC1Q9NWM3 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CUEDC1Q9NWM3 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CUEDC1Q9NWM3 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
CUEDC1Q9NWM3 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CUEDC1Q9NWM3 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
CUEDC1Q9NWM3 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.08■□□□□ 0.49
CUEDC1Q9NWM3 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CUEDC1Q9NWM3 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CUEDC1Q9NWM3 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CUEDC1Q9NWM3 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
CUEDC1Q9NWM3 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.08■□□□□ 0.48
CUEDC1Q9NWM3 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CUEDC1Q9NWM3 AC128688.1-201ENST00000487626 519 ntBASIC18.08■□□□□ 0.48
CUEDC1Q9NWM3 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.08■□□□□ 0.48
CUEDC1Q9NWM3 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.08■□□□□ 0.48
CUEDC1Q9NWM3 AC087388.1-201ENST00000571370 1112 ntBASIC18.08■□□□□ 0.48
CUEDC1Q9NWM3 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CUEDC1Q9NWM3 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CUEDC1Q9NWM3 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.08■□□□□ 0.48
CUEDC1Q9NWM3 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CUEDC1Q9NWM3 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CUEDC1Q9NWM3 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CUEDC1Q9NWM3 AC008556.1-201ENST00000610908 2040 ntBASIC18.08■□□□□ 0.48
CUEDC1Q9NWM3 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
CUEDC1Q9NWM3 MTMR9LP-203ENST00000426597 1545 ntBASIC18.08■□□□□ 0.48
CUEDC1Q9NWM3 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.08■□□□□ 0.48
CUEDC1Q9NWM3 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CUEDC1Q9NWM3 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.07■□□□□ 0.48
CUEDC1Q9NWM3 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CUEDC1Q9NWM3 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CUEDC1Q9NWM3 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.07■□□□□ 0.48
CUEDC1Q9NWM3 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.07■□□□□ 0.48
CUEDC1Q9NWM3 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CUEDC1Q9NWM3 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CUEDC1Q9NWM3 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
CUEDC1Q9NWM3 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CUEDC1Q9NWM3 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CUEDC1Q9NWM3 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CUEDC1Q9NWM3 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CUEDC1Q9NWM3 MCCD1P1-208ENST00000445732 328 ntBASIC18.07■□□□□ 0.48
CUEDC1Q9NWM3 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.07■□□□□ 0.48
CUEDC1Q9NWM3 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.07■□□□□ 0.48
CUEDC1Q9NWM3 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CUEDC1Q9NWM3 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CUEDC1Q9NWM3 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
CUEDC1Q9NWM3 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.07■□□□□ 0.48
CUEDC1Q9NWM3 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.07■□□□□ 0.48
CUEDC1Q9NWM3 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CUEDC1Q9NWM3 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CUEDC1Q9NWM3 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.07■□□□□ 0.48
CUEDC1Q9NWM3 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
CUEDC1Q9NWM3 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.07■□□□□ 0.48
CUEDC1Q9NWM3 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CUEDC1Q9NWM3 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CUEDC1Q9NWM3 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CUEDC1Q9NWM3 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.06■□□□□ 0.48
CUEDC1Q9NWM3 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CUEDC1Q9NWM3 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CUEDC1Q9NWM3 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
CUEDC1Q9NWM3 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CUEDC1Q9NWM3 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.06■□□□□ 0.48
CUEDC1Q9NWM3 TERF1P1-201ENST00000311003 1181 ntBASIC18.06■□□□□ 0.48
CUEDC1Q9NWM3 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CUEDC1Q9NWM3 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CUEDC1Q9NWM3 DUX4L26-201ENST00000489078 1255 ntBASIC18.06■□□□□ 0.48
CUEDC1Q9NWM3 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
CUEDC1Q9NWM3 NTF6B-201ENST00000591913 560 ntBASIC18.06■□□□□ 0.48
CUEDC1Q9NWM3 AC010653.2-201ENST00000623505 997 ntBASIC18.06■□□□□ 0.48
CUEDC1Q9NWM3 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CUEDC1Q9NWM3 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CUEDC1Q9NWM3 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CUEDC1Q9NWM3 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.06■□□□□ 0.48
CUEDC1Q9NWM3 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CUEDC1Q9NWM3 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CUEDC1Q9NWM3 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CUEDC1Q9NWM3 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CUEDC1Q9NWM3 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.05■□□□□ 0.48
CUEDC1Q9NWM3 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.05■□□□□ 0.48
CUEDC1Q9NWM3 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
CUEDC1Q9NWM3 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms