Protein–RNA interactions for Protein: Q9NW13

RBM28, RNA-binding protein 28, humanhuman

Known RBP Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28Q9NW13 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC21.69■■□□□ 1.06
RBM28Q9NW13 AC010203.1-204ENST00000548782 407 ntBASIC21.69■■□□□ 1.06
RBM28Q9NW13 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RBM28Q9NW13 AC112777.1-201ENST00000540175 1423 ntBASIC21.69■■□□□ 1.06
RBM28Q9NW13 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
RBM28Q9NW13 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC21.69■■□□□ 1.06
RBM28Q9NW13 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RBM28Q9NW13 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RBM28Q9NW13 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RBM28Q9NW13 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RBM28Q9NW13 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC21.68■■□□□ 1.06
RBM28Q9NW13 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
RBM28Q9NW13 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RBM28Q9NW13 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RBM28Q9NW13 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RBM28Q9NW13 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RBM28Q9NW13 AL137013.1-201ENST00000432946 1228 ntBASIC21.68■■□□□ 1.06
RBM28Q9NW13 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC21.68■■□□□ 1.06
RBM28Q9NW13 AC009947.2-201ENST00000444014 672 ntBASIC21.68■■□□□ 1.06
RBM28Q9NW13 P4HB-223ENST00000576390 439 ntTSL 4 BASIC21.68■■□□□ 1.06
RBM28Q9NW13 NEK4P2-201ENST00000580004 1012 ntBASIC21.68■■□□□ 1.06
RBM28Q9NW13 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RBM28Q9NW13 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
RBM28Q9NW13 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC21.68■■□□□ 1.06
RBM28Q9NW13 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RBM28Q9NW13 HOXB1-202ENST00000577092 1414 ntBASIC21.68■■□□□ 1.06
RBM28Q9NW13 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC21.68■■□□□ 1.06
RBM28Q9NW13 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RBM28Q9NW13 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RBM28Q9NW13 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
RBM28Q9NW13 AL138781.2-201ENST00000617896 1843 ntBASIC21.68■■□□□ 1.06
RBM28Q9NW13 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RBM28Q9NW13 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RBM28Q9NW13 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC21.68■■□□□ 1.06
RBM28Q9NW13 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
RBM28Q9NW13 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC21.68■■□□□ 1.06
RBM28Q9NW13 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC21.68■■□□□ 1.06
RBM28Q9NW13 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RBM28Q9NW13 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RBM28Q9NW13 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC21.67■■□□□ 1.06
RBM28Q9NW13 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
RBM28Q9NW13 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
RBM28Q9NW13 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC21.67■■□□□ 1.06
RBM28Q9NW13 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RBM28Q9NW13 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC21.67■■□□□ 1.06
RBM28Q9NW13 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
RBM28Q9NW13 TERF1P1-201ENST00000311003 1181 ntBASIC21.67■■□□□ 1.06
RBM28Q9NW13 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
RBM28Q9NW13 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RBM28Q9NW13 ATP5G1P1-201ENST00000448724 379 ntBASIC21.67■■□□□ 1.06
RBM28Q9NW13 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RBM28Q9NW13 NT5C-210ENST00000582160 860 ntTSL 2 BASIC21.67■■□□□ 1.06
RBM28Q9NW13 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC21.67■■□□□ 1.06
RBM28Q9NW13 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RBM28Q9NW13 AC141257.4-201ENST00000634557 245 ntBASIC21.67■■□□□ 1.06
RBM28Q9NW13 AC136944.6-201ENST00000634818 245 ntBASIC21.67■■□□□ 1.06
RBM28Q9NW13 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
RBM28Q9NW13 AC004408.2-201ENST00000623613 2777 ntBASIC21.67■■□□□ 1.06
RBM28Q9NW13 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC21.67■■□□□ 1.06
RBM28Q9NW13 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC21.67■■□□□ 1.06
RBM28Q9NW13 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RBM28Q9NW13 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RBM28Q9NW13 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC21.66■■□□□ 1.06
RBM28Q9NW13 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RBM28Q9NW13 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
RBM28Q9NW13 LGALS8-AS1-201ENST00000487567 1457 ntBASIC21.66■■□□□ 1.06
RBM28Q9NW13 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RBM28Q9NW13 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RBM28Q9NW13 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
RBM28Q9NW13 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC21.66■■□□□ 1.06
RBM28Q9NW13 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RBM28Q9NW13 AP000593.1-201ENST00000393668 712 ntBASIC21.66■■□□□ 1.06
RBM28Q9NW13 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RBM28Q9NW13 AP000523.1-201ENST00000398242 1049 ntBASIC21.66■■□□□ 1.06
RBM28Q9NW13 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC21.66■■□□□ 1.06
RBM28Q9NW13 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC21.66■■□□□ 1.06
RBM28Q9NW13 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC21.66■■□□□ 1.06
RBM28Q9NW13 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
RBM28Q9NW13 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC21.66■■□□□ 1.06
RBM28Q9NW13 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC21.66■■□□□ 1.06
RBM28Q9NW13 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
RBM28Q9NW13 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
RBM28Q9NW13 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
RBM28Q9NW13 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
RBM28Q9NW13 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RBM28Q9NW13 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
RBM28Q9NW13 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC21.66■■□□□ 1.06
RBM28Q9NW13 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC21.66■■□□□ 1.06
RBM28Q9NW13 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RBM28Q9NW13 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RBM28Q9NW13 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC21.66■■□□□ 1.06
RBM28Q9NW13 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RBM28Q9NW13 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC21.66■■□□□ 1.06
RBM28Q9NW13 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
RBM28Q9NW13 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RBM28Q9NW13 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC21.66■■□□□ 1.06
RBM28Q9NW13 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
RBM28Q9NW13 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RBM28Q9NW13 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RBM28Q9NW13 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms