Protein–RNA interactions for Protein: Q9NP91

SLC6A20, Sodium- and chloride-dependent transporter XTRP3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20Q9NP91 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC6A20Q9NP91 MIR564-202ENST00000385049 94 ntBASIC17.96■□□□□ 0.47
SLC6A20Q9NP91 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC6A20Q9NP91 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC6A20Q9NP91 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.96■□□□□ 0.47
SLC6A20Q9NP91 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.96■□□□□ 0.47
SLC6A20Q9NP91 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC6A20Q9NP91 DUX4L26-201ENST00000489078 1255 ntBASIC17.96■□□□□ 0.47
SLC6A20Q9NP91 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.96■□□□□ 0.47
SLC6A20Q9NP91 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.96■□□□□ 0.47
SLC6A20Q9NP91 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.96■□□□□ 0.47
SLC6A20Q9NP91 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.96■□□□□ 0.47
SLC6A20Q9NP91 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.96■□□□□ 0.47
SLC6A20Q9NP91 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.96■□□□□ 0.47
SLC6A20Q9NP91 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC6A20Q9NP91 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC6A20Q9NP91 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
SLC6A20Q9NP91 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
SLC6A20Q9NP91 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
SLC6A20Q9NP91 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SLC6A20Q9NP91 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
SLC6A20Q9NP91 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
SLC6A20Q9NP91 TNXA-203ENST00000507684 2038 ntBASIC17.96■□□□□ 0.47
SLC6A20Q9NP91 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC6A20Q9NP91 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SLC6A20Q9NP91 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC6A20Q9NP91 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC6A20Q9NP91 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.96■□□□□ 0.47
SLC6A20Q9NP91 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC6A20Q9NP91 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.96■□□□□ 0.47
SLC6A20Q9NP91 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.96■□□□□ 0.46
SLC6A20Q9NP91 AC093525.10-201ENST00000625130 1569 ntBASIC17.96■□□□□ 0.46
SLC6A20Q9NP91 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC6A20Q9NP91 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.95■□□□□ 0.46
SLC6A20Q9NP91 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.95■□□□□ 0.46
SLC6A20Q9NP91 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.95■□□□□ 0.46
SLC6A20Q9NP91 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
SLC6A20Q9NP91 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.95■□□□□ 0.46
SLC6A20Q9NP91 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC6A20Q9NP91 Z98044.1-201ENST00000632503 1764 ntBASIC17.95■□□□□ 0.46
SLC6A20Q9NP91 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC6A20Q9NP91 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
SLC6A20Q9NP91 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
SLC6A20Q9NP91 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.95■□□□□ 0.46
SLC6A20Q9NP91 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.95■□□□□ 0.46
SLC6A20Q9NP91 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.95■□□□□ 0.46
SLC6A20Q9NP91 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SLC6A20Q9NP91 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
SLC6A20Q9NP91 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC6A20Q9NP91 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC6A20Q9NP91 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC6A20Q9NP91 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC6A20Q9NP91 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC6A20Q9NP91 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC6A20Q9NP91 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.94■□□□□ 0.46
SLC6A20Q9NP91 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
SLC6A20Q9NP91 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC6A20Q9NP91 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC6A20Q9NP91 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.94■□□□□ 0.46
SLC6A20Q9NP91 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SLC6A20Q9NP91 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC6A20Q9NP91 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC6A20Q9NP91 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC6A20Q9NP91 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC6A20Q9NP91 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.94■□□□□ 0.46
SLC6A20Q9NP91 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.94■□□□□ 0.46
SLC6A20Q9NP91 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SLC6A20Q9NP91 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC6A20Q9NP91 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC6A20Q9NP91 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
SLC6A20Q9NP91 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.94■□□□□ 0.46
SLC6A20Q9NP91 AC006011.2-201ENST00000621313 1158 ntBASIC17.94■□□□□ 0.46
SLC6A20Q9NP91 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC6A20Q9NP91 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC6A20Q9NP91 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SLC6A20Q9NP91 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC6A20Q9NP91 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC6A20Q9NP91 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.94■□□□□ 0.46
SLC6A20Q9NP91 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC6A20Q9NP91 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC6A20Q9NP91 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC6A20Q9NP91 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SLC6A20Q9NP91 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.94■□□□□ 0.46
SLC6A20Q9NP91 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC6A20Q9NP91 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC6A20Q9NP91 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SLC6A20Q9NP91 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SLC6A20Q9NP91 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC6A20Q9NP91 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC6A20Q9NP91 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.93■□□□□ 0.46
SLC6A20Q9NP91 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC6A20Q9NP91 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SLC6A20Q9NP91 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.93■□□□□ 0.46
SLC6A20Q9NP91 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SLC6A20Q9NP91 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC6A20Q9NP91 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC6A20Q9NP91 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC6A20Q9NP91 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
SLC6A20Q9NP91 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SLC6A20Q9NP91 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms