Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VCX3AQ9NNX9 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VCX3AQ9NNX9 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VCX3AQ9NNX9 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.5■□□□□ 0.39
VCX3AQ9NNX9 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VCX3AQ9NNX9 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
VCX3AQ9NNX9 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
VCX3AQ9NNX9 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VCX3AQ9NNX9 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VCX3AQ9NNX9 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VCX3AQ9NNX9 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VCX3AQ9NNX9 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VCX3AQ9NNX9 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
VCX3AQ9NNX9 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.5■□□□□ 0.39
VCX3AQ9NNX9 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.49■□□□□ 0.39
VCX3AQ9NNX9 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
VCX3AQ9NNX9 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VCX3AQ9NNX9 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
VCX3AQ9NNX9 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
VCX3AQ9NNX9 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.49■□□□□ 0.39
VCX3AQ9NNX9 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VCX3AQ9NNX9 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
VCX3AQ9NNX9 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
VCX3AQ9NNX9 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
VCX3AQ9NNX9 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
VCX3AQ9NNX9 AC103702.1-201ENST00000548801 2630 ntBASIC17.49■□□□□ 0.39
VCX3AQ9NNX9 NAA20-201ENST00000310450 920 ntTSL 2 BASIC17.49■□□□□ 0.39
VCX3AQ9NNX9 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
VCX3AQ9NNX9 SLC25A6P5-201ENST00000435663 894 ntBASIC17.49■□□□□ 0.39
VCX3AQ9NNX9 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
VCX3AQ9NNX9 CPT2-209ENST00000636935 803 ntTSL 5 BASIC17.49■□□□□ 0.39
VCX3AQ9NNX9 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.49■□□□□ 0.39
VCX3AQ9NNX9 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VCX3AQ9NNX9 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
VCX3AQ9NNX9 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.49■□□□□ 0.39
VCX3AQ9NNX9 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.49■□□□□ 0.39
VCX3AQ9NNX9 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
VCX3AQ9NNX9 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.49■□□□□ 0.39
VCX3AQ9NNX9 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.49■□□□□ 0.39
VCX3AQ9NNX9 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VCX3AQ9NNX9 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VCX3AQ9NNX9 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
VCX3AQ9NNX9 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VCX3AQ9NNX9 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VCX3AQ9NNX9 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
VCX3AQ9NNX9 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VCX3AQ9NNX9 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VCX3AQ9NNX9 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.48■□□□□ 0.39
VCX3AQ9NNX9 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
VCX3AQ9NNX9 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
VCX3AQ9NNX9 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VCX3AQ9NNX9 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VCX3AQ9NNX9 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
VCX3AQ9NNX9 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.48■□□□□ 0.39
VCX3AQ9NNX9 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VCX3AQ9NNX9 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
VCX3AQ9NNX9 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.48■□□□□ 0.39
VCX3AQ9NNX9 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VCX3AQ9NNX9 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
VCX3AQ9NNX9 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
VCX3AQ9NNX9 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC17.48■□□□□ 0.39
VCX3AQ9NNX9 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
VCX3AQ9NNX9 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VCX3AQ9NNX9 SERP1-208ENST00000491660 830 ntTSL 2 BASIC17.48■□□□□ 0.39
VCX3AQ9NNX9 AL512631.2-201ENST00000604634 923 ntBASIC17.48■□□□□ 0.39
VCX3AQ9NNX9 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
VCX3AQ9NNX9 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
VCX3AQ9NNX9 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VCX3AQ9NNX9 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VCX3AQ9NNX9 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VCX3AQ9NNX9 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
VCX3AQ9NNX9 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
VCX3AQ9NNX9 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.48■□□□□ 0.39
VCX3AQ9NNX9 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.48■□□□□ 0.39
VCX3AQ9NNX9 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.47■□□□□ 0.39
VCX3AQ9NNX9 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
VCX3AQ9NNX9 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.47■□□□□ 0.39
VCX3AQ9NNX9 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VCX3AQ9NNX9 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VCX3AQ9NNX9 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.47■□□□□ 0.39
VCX3AQ9NNX9 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
VCX3AQ9NNX9 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
VCX3AQ9NNX9 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.47■□□□□ 0.39
VCX3AQ9NNX9 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VCX3AQ9NNX9 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
VCX3AQ9NNX9 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VCX3AQ9NNX9 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.47■□□□□ 0.39
VCX3AQ9NNX9 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.47■□□□□ 0.39
VCX3AQ9NNX9 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.47■□□□□ 0.39
VCX3AQ9NNX9 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.47■□□□□ 0.39
VCX3AQ9NNX9 AC243732.1-201ENST00000612648 864 ntBASIC17.47■□□□□ 0.39
VCX3AQ9NNX9 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
VCX3AQ9NNX9 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC17.47■□□□□ 0.39
VCX3AQ9NNX9 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VCX3AQ9NNX9 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.47■□□□□ 0.39
VCX3AQ9NNX9 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.47■□□□□ 0.39
VCX3AQ9NNX9 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.47■□□□□ 0.39
VCX3AQ9NNX9 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.47■□□□□ 0.39
VCX3AQ9NNX9 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
VCX3AQ9NNX9 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms