Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
KIAA1549Q9HCM3 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.68■□□□□ 0.26
KIAA1549Q9HCM3 AC024243.1-201ENST00000609234 778 ntBASIC16.68■□□□□ 0.26
KIAA1549Q9HCM3 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KIAA1549Q9HCM3 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KIAA1549Q9HCM3 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KIAA1549Q9HCM3 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
KIAA1549Q9HCM3 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
KIAA1549Q9HCM3 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.67■□□□□ 0.26
KIAA1549Q9HCM3 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KIAA1549Q9HCM3 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
KIAA1549Q9HCM3 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC16.67■□□□□ 0.26
KIAA1549Q9HCM3 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
KIAA1549Q9HCM3 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
KIAA1549Q9HCM3 AL499627.1-201ENST00000569373 2188 ntBASIC16.67■□□□□ 0.26
KIAA1549Q9HCM3 LINC01311-201ENST00000565162 1445 ntBASIC16.67■□□□□ 0.26
KIAA1549Q9HCM3 AP000974.1-201ENST00000623909 2387 ntBASIC16.67■□□□□ 0.26
KIAA1549Q9HCM3 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KIAA1549Q9HCM3 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KIAA1549Q9HCM3 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
KIAA1549Q9HCM3 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.67■□□□□ 0.26
KIAA1549Q9HCM3 AC091076.1-201ENST00000610741 619 ntBASIC16.67■□□□□ 0.26
KIAA1549Q9HCM3 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.67■□□□□ 0.26
KIAA1549Q9HCM3 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC16.67■□□□□ 0.26
KIAA1549Q9HCM3 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.67■□□□□ 0.26
KIAA1549Q9HCM3 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
KIAA1549Q9HCM3 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KIAA1549Q9HCM3 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
KIAA1549Q9HCM3 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
KIAA1549Q9HCM3 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KIAA1549Q9HCM3 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
KIAA1549Q9HCM3 KRT8P32-201ENST00000512863 1461 ntBASIC16.66■□□□□ 0.26
KIAA1549Q9HCM3 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.66■□□□□ 0.26
KIAA1549Q9HCM3 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
KIAA1549Q9HCM3 HCG4P8-203ENST00000443049 980 ntBASIC16.66■□□□□ 0.26
KIAA1549Q9HCM3 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.66■□□□□ 0.26
KIAA1549Q9HCM3 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
KIAA1549Q9HCM3 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.66■□□□□ 0.26
KIAA1549Q9HCM3 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.66■□□□□ 0.26
KIAA1549Q9HCM3 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.66■□□□□ 0.26
KIAA1549Q9HCM3 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.66■□□□□ 0.26
KIAA1549Q9HCM3 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KIAA1549Q9HCM3 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.66■□□□□ 0.26
KIAA1549Q9HCM3 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.66■□□□□ 0.26
KIAA1549Q9HCM3 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
KIAA1549Q9HCM3 KRT8P50-201ENST00000562022 1438 ntBASIC16.66■□□□□ 0.26
KIAA1549Q9HCM3 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
KIAA1549Q9HCM3 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.66■□□□□ 0.26
KIAA1549Q9HCM3 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KIAA1549Q9HCM3 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
KIAA1549Q9HCM3 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KIAA1549Q9HCM3 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.66■□□□□ 0.26
KIAA1549Q9HCM3 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
KIAA1549Q9HCM3 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.66■□□□□ 0.26
KIAA1549Q9HCM3 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.66■□□□□ 0.26
KIAA1549Q9HCM3 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
KIAA1549Q9HCM3 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.66■□□□□ 0.26
KIAA1549Q9HCM3 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.65■□□□□ 0.26
KIAA1549Q9HCM3 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
KIAA1549Q9HCM3 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
KIAA1549Q9HCM3 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
KIAA1549Q9HCM3 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KIAA1549Q9HCM3 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
KIAA1549Q9HCM3 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC16.65■□□□□ 0.26
KIAA1549Q9HCM3 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
KIAA1549Q9HCM3 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.65■□□□□ 0.26
KIAA1549Q9HCM3 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KIAA1549Q9HCM3 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
KIAA1549Q9HCM3 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.65■□□□□ 0.26
KIAA1549Q9HCM3 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KIAA1549Q9HCM3 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
KIAA1549Q9HCM3 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.65■□□□□ 0.26
KIAA1549Q9HCM3 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.65■□□□□ 0.26
KIAA1549Q9HCM3 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.65■□□□□ 0.26
KIAA1549Q9HCM3 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.65■□□□□ 0.26
KIAA1549Q9HCM3 AL109659.2-201ENST00000606809 1674 ntBASIC16.65■□□□□ 0.26
KIAA1549Q9HCM3 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.65■□□□□ 0.26
KIAA1549Q9HCM3 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KIAA1549Q9HCM3 IER3-202ENST00000376377 1350 ntBASIC16.65■□□□□ 0.26
KIAA1549Q9HCM3 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KIAA1549Q9HCM3 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.65■□□□□ 0.26
KIAA1549Q9HCM3 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
KIAA1549Q9HCM3 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.65■□□□□ 0.26
KIAA1549Q9HCM3 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
KIAA1549Q9HCM3 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.64■□□□□ 0.25
KIAA1549Q9HCM3 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.64■□□□□ 0.25
KIAA1549Q9HCM3 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
KIAA1549Q9HCM3 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.64■□□□□ 0.25
KIAA1549Q9HCM3 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KIAA1549Q9HCM3 AL031598.1-201ENST00000561511 1773 ntBASIC16.64■□□□□ 0.25
KIAA1549Q9HCM3 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KIAA1549Q9HCM3 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
KIAA1549Q9HCM3 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
KIAA1549Q9HCM3 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.64■□□□□ 0.25
KIAA1549Q9HCM3 AL645929.1-201ENST00000420084 975 ntBASIC16.64■□□□□ 0.25
KIAA1549Q9HCM3 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.64■□□□□ 0.25
KIAA1549Q9HCM3 HLA-F-220ENST00000434407 884 ntBASIC16.64■□□□□ 0.25
KIAA1549Q9HCM3 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
KIAA1549Q9HCM3 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.64■□□□□ 0.25
KIAA1549Q9HCM3 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms