Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 KRT18P2-201ENST00000447938 1258 ntBASIC17.38■□□□□ 0.37
CHD8Q9HCK8 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CHD8Q9HCK8 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.38■□□□□ 0.37
CHD8Q9HCK8 AC105339.3-201ENST00000560043 636 ntBASIC17.38■□□□□ 0.37
CHD8Q9HCK8 AC084346.2-201ENST00000607097 949 ntBASIC17.38■□□□□ 0.37
CHD8Q9HCK8 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.38■□□□□ 0.37
CHD8Q9HCK8 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.38■□□□□ 0.37
CHD8Q9HCK8 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHD8Q9HCK8 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHD8Q9HCK8 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.38■□□□□ 0.37
CHD8Q9HCK8 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHD8Q9HCK8 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CHD8Q9HCK8 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHD8Q9HCK8 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.38■□□□□ 0.37
CHD8Q9HCK8 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHD8Q9HCK8 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.37■□□□□ 0.37
CHD8Q9HCK8 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC17.37■□□□□ 0.37
CHD8Q9HCK8 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHD8Q9HCK8 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHD8Q9HCK8 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHD8Q9HCK8 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC17.37■□□□□ 0.37
CHD8Q9HCK8 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHD8Q9HCK8 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHD8Q9HCK8 AC092910.1-201ENST00000482027 1129 ntBASIC17.37■□□□□ 0.37
CHD8Q9HCK8 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHD8Q9HCK8 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CHD8Q9HCK8 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC17.37■□□□□ 0.37
CHD8Q9HCK8 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHD8Q9HCK8 TP73-AS1-210ENST00000637775 1455 ntBASIC17.37■□□□□ 0.37
CHD8Q9HCK8 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHD8Q9HCK8 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHD8Q9HCK8 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.37■□□□□ 0.37
CHD8Q9HCK8 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHD8Q9HCK8 AC244015.2-201ENST00000616358 1861 ntBASIC17.37■□□□□ 0.37
CHD8Q9HCK8 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC17.37■□□□□ 0.37
CHD8Q9HCK8 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHD8Q9HCK8 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHD8Q9HCK8 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.36■□□□□ 0.37
CHD8Q9HCK8 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.36■□□□□ 0.37
CHD8Q9HCK8 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHD8Q9HCK8 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC17.36■□□□□ 0.37
CHD8Q9HCK8 PARP8-218ENST00000513738 596 ntTSL 4 BASIC17.36■□□□□ 0.37
CHD8Q9HCK8 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.36■□□□□ 0.37
CHD8Q9HCK8 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.36■□□□□ 0.37
CHD8Q9HCK8 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.36■□□□□ 0.37
CHD8Q9HCK8 AC092865.6-201ENST00000642101 219 ntBASIC17.36■□□□□ 0.37
CHD8Q9HCK8 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHD8Q9HCK8 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHD8Q9HCK8 HEIH-201ENST00000623091 1652 ntBASIC17.36■□□□□ 0.37
CHD8Q9HCK8 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC17.36■□□□□ 0.37
CHD8Q9HCK8 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHD8Q9HCK8 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.36■□□□□ 0.37
CHD8Q9HCK8 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHD8Q9HCK8 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.36■□□□□ 0.37
CHD8Q9HCK8 AL359881.2-201ENST00000602973 570 ntBASIC17.36■□□□□ 0.37
CHD8Q9HCK8 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHD8Q9HCK8 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.36■□□□□ 0.37
CHD8Q9HCK8 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CHD8Q9HCK8 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHD8Q9HCK8 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHD8Q9HCK8 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHD8Q9HCK8 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHD8Q9HCK8 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.35■□□□□ 0.37
CHD8Q9HCK8 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHD8Q9HCK8 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.35■□□□□ 0.37
CHD8Q9HCK8 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.35■□□□□ 0.37
CHD8Q9HCK8 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CHD8Q9HCK8 AP001271.2-201ENST00000624018 1556 ntBASIC17.35■□□□□ 0.37
CHD8Q9HCK8 AP002414.3-201ENST00000589352 1468 ntBASIC17.35■□□□□ 0.37
CHD8Q9HCK8 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHD8Q9HCK8 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHD8Q9HCK8 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHD8Q9HCK8 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.35■□□□□ 0.37
CHD8Q9HCK8 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHD8Q9HCK8 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHD8Q9HCK8 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHD8Q9HCK8 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
CHD8Q9HCK8 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC17.35■□□□□ 0.37
CHD8Q9HCK8 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.35■□□□□ 0.37
CHD8Q9HCK8 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHD8Q9HCK8 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CHD8Q9HCK8 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CHD8Q9HCK8 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHD8Q9HCK8 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHD8Q9HCK8 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHD8Q9HCK8 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC17.35■□□□□ 0.37
CHD8Q9HCK8 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.35■□□□□ 0.37
CHD8Q9HCK8 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC17.34■□□□□ 0.37
CHD8Q9HCK8 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC17.34■□□□□ 0.37
CHD8Q9HCK8 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CHD8Q9HCK8 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHD8Q9HCK8 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.34■□□□□ 0.37
CHD8Q9HCK8 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.34■□□□□ 0.37
CHD8Q9HCK8 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.34■□□□□ 0.37
CHD8Q9HCK8 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.34■□□□□ 0.37
CHD8Q9HCK8 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.34■□□□□ 0.37
CHD8Q9HCK8 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.34■□□□□ 0.37
CHD8Q9HCK8 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.34■□□□□ 0.37
CHD8Q9HCK8 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHD8Q9HCK8 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms