Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VPS11Q9H270 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
VPS11Q9H270 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VPS11Q9H270 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
VPS11Q9H270 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.85■□□□□ 0.61
VPS11Q9H270 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.85■□□□□ 0.61
VPS11Q9H270 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.85■□□□□ 0.61
VPS11Q9H270 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.85■□□□□ 0.61
VPS11Q9H270 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
VPS11Q9H270 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
VPS11Q9H270 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.85■□□□□ 0.61
VPS11Q9H270 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
VPS11Q9H270 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
VPS11Q9H270 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.85■□□□□ 0.61
VPS11Q9H270 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
VPS11Q9H270 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.85■□□□□ 0.61
VPS11Q9H270 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
VPS11Q9H270 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
VPS11Q9H270 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.85■□□□□ 0.61
VPS11Q9H270 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
VPS11Q9H270 AC126763.1-201ENST00000552015 2118 ntBASIC18.85■□□□□ 0.61
VPS11Q9H270 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.84■□□□□ 0.61
VPS11Q9H270 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.84■□□□□ 0.61
VPS11Q9H270 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VPS11Q9H270 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VPS11Q9H270 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VPS11Q9H270 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.84■□□□□ 0.61
VPS11Q9H270 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VPS11Q9H270 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
VPS11Q9H270 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
VPS11Q9H270 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VPS11Q9H270 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VPS11Q9H270 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
VPS11Q9H270 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VPS11Q9H270 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VPS11Q9H270 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VPS11Q9H270 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
VPS11Q9H270 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.84■□□□□ 0.61
VPS11Q9H270 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.84■□□□□ 0.61
VPS11Q9H270 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.84■□□□□ 0.61
VPS11Q9H270 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.84■□□□□ 0.61
VPS11Q9H270 C1QL1P1-201ENST00000568105 661 ntBASIC18.84■□□□□ 0.61
VPS11Q9H270 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.84■□□□□ 0.61
VPS11Q9H270 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.84■□□□□ 0.61
VPS11Q9H270 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VPS11Q9H270 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
VPS11Q9H270 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VPS11Q9H270 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
VPS11Q9H270 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
VPS11Q9H270 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.84■□□□□ 0.61
VPS11Q9H270 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
VPS11Q9H270 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
VPS11Q9H270 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VPS11Q9H270 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
VPS11Q9H270 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
VPS11Q9H270 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.83■□□□□ 0.61
VPS11Q9H270 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
VPS11Q9H270 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
VPS11Q9H270 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
VPS11Q9H270 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.83■□□□□ 0.61
VPS11Q9H270 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.83■□□□□ 0.61
VPS11Q9H270 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
VPS11Q9H270 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
VPS11Q9H270 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.83■□□□□ 0.61
VPS11Q9H270 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.61
VPS11Q9H270 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VPS11Q9H270 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
VPS11Q9H270 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
VPS11Q9H270 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
VPS11Q9H270 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.83■□□□□ 0.6
VPS11Q9H270 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.83■□□□□ 0.6
VPS11Q9H270 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.83■□□□□ 0.6
VPS11Q9H270 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.83■□□□□ 0.6
VPS11Q9H270 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
VPS11Q9H270 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
VPS11Q9H270 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.83■□□□□ 0.6
VPS11Q9H270 AC104771.1-201ENST00000603335 964 ntBASIC18.83■□□□□ 0.6
VPS11Q9H270 AC004264.1-201ENST00000608354 794 ntBASIC18.83■□□□□ 0.6
VPS11Q9H270 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.83■□□□□ 0.6
VPS11Q9H270 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
VPS11Q9H270 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
VPS11Q9H270 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
VPS11Q9H270 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
VPS11Q9H270 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VPS11Q9H270 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.83■□□□□ 0.6
VPS11Q9H270 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
VPS11Q9H270 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
VPS11Q9H270 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.83■□□□□ 0.6
VPS11Q9H270 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VPS11Q9H270 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VPS11Q9H270 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
VPS11Q9H270 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
VPS11Q9H270 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
VPS11Q9H270 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.82■□□□□ 0.6
VPS11Q9H270 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VPS11Q9H270 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.82■□□□□ 0.6
VPS11Q9H270 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
VPS11Q9H270 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VPS11Q9H270 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VPS11Q9H270 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms