Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC15.69■□□□□ 0.1
PCGF1Q9BSM1 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCGF1Q9BSM1 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCGF1Q9BSM1 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCGF1Q9BSM1 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCGF1Q9BSM1 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
PCGF1Q9BSM1 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
PCGF1Q9BSM1 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
PCGF1Q9BSM1 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PCGF1Q9BSM1 TK2-213ENST00000563369 882 ntTSL 5 BASIC15.69■□□□□ 0.1
PCGF1Q9BSM1 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC15.69■□□□□ 0.1
PCGF1Q9BSM1 AC092865.7-201ENST00000641832 219 ntBASIC15.69■□□□□ 0.1
PCGF1Q9BSM1 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCGF1Q9BSM1 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC15.69■□□□□ 0.1
PCGF1Q9BSM1 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC15.69■□□□□ 0.1
PCGF1Q9BSM1 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC15.69■□□□□ 0.1
PCGF1Q9BSM1 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCGF1Q9BSM1 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCGF1Q9BSM1 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCGF1Q9BSM1 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC15.69■□□□□ 0.1
PCGF1Q9BSM1 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCGF1Q9BSM1 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCGF1Q9BSM1 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCGF1Q9BSM1 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC15.68■□□□□ 0.1
PCGF1Q9BSM1 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
PCGF1Q9BSM1 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCGF1Q9BSM1 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC15.68■□□□□ 0.1
PCGF1Q9BSM1 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
PCGF1Q9BSM1 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCGF1Q9BSM1 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCGF1Q9BSM1 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCGF1Q9BSM1 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC15.68■□□□□ 0.1
PCGF1Q9BSM1 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC15.68■□□□□ 0.1
PCGF1Q9BSM1 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
PCGF1Q9BSM1 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
PCGF1Q9BSM1 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
PCGF1Q9BSM1 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC15.68■□□□□ 0.1
PCGF1Q9BSM1 TERF1P1-201ENST00000311003 1181 ntBASIC15.68■□□□□ 0.1
PCGF1Q9BSM1 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCGF1Q9BSM1 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC15.68■□□□□ 0.1
PCGF1Q9BSM1 INGX-201ENST00000359239 846 ntBASIC15.68■□□□□ 0.1
PCGF1Q9BSM1 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC15.68■□□□□ 0.1
PCGF1Q9BSM1 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC15.68■□□□□ 0.1
PCGF1Q9BSM1 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PCGF1Q9BSM1 SLC25A1P2-201ENST00000430693 912 ntBASIC15.68■□□□□ 0.1
PCGF1Q9BSM1 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC15.68■□□□□ 0.1
PCGF1Q9BSM1 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC15.68■□□□□ 0.1
PCGF1Q9BSM1 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC15.68■□□□□ 0.1
PCGF1Q9BSM1 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
PCGF1Q9BSM1 CKBP1-201ENST00000565489 1086 ntBASIC15.68■□□□□ 0.1
PCGF1Q9BSM1 P4HB-223ENST00000576390 439 ntTSL 4 BASIC15.68■□□□□ 0.1
PCGF1Q9BSM1 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PCGF1Q9BSM1 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCGF1Q9BSM1 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
PCGF1Q9BSM1 SDHAP1-207ENST00000440850 2000 ntBASIC15.68■□□□□ 0.1
PCGF1Q9BSM1 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
PCGF1Q9BSM1 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCGF1Q9BSM1 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCGF1Q9BSM1 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCGF1Q9BSM1 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCGF1Q9BSM1 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PCGF1Q9BSM1 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC15.68■□□□□ 0.1
PCGF1Q9BSM1 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCGF1Q9BSM1 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC15.68■□□□□ 0.1
PCGF1Q9BSM1 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
PCGF1Q9BSM1 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC15.67■□□□□ 0.1
PCGF1Q9BSM1 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCGF1Q9BSM1 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCGF1Q9BSM1 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PCGF1Q9BSM1 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC15.67■□□□□ 0.1
PCGF1Q9BSM1 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC15.67■□□□□ 0.1
PCGF1Q9BSM1 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PCGF1Q9BSM1 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCGF1Q9BSM1 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC15.67■□□□□ 0.1
PCGF1Q9BSM1 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCGF1Q9BSM1 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
PCGF1Q9BSM1 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCGF1Q9BSM1 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCGF1Q9BSM1 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC15.67■□□□□ 0.1
PCGF1Q9BSM1 PRSS44-201ENST00000515154 1146 ntBASIC15.67■□□□□ 0.1
PCGF1Q9BSM1 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
PCGF1Q9BSM1 AC010331.1-201ENST00000611423 582 ntBASIC15.67■□□□□ 0.1
PCGF1Q9BSM1 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PCGF1Q9BSM1 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
PCGF1Q9BSM1 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC15.67■□□□□ 0.1
PCGF1Q9BSM1 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC15.67■□□□□ 0.1
PCGF1Q9BSM1 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCGF1Q9BSM1 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC15.67■□□□□ 0.1
PCGF1Q9BSM1 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCGF1Q9BSM1 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCGF1Q9BSM1 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCGF1Q9BSM1 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC15.67■□□□□ 0.1
PCGF1Q9BSM1 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
PCGF1Q9BSM1 KRT8P11-201ENST00000409686 1436 ntBASIC15.67■□□□□ 0.1
PCGF1Q9BSM1 ADK-206ENST00000541550 2222 ntTSL 2 BASIC15.67■□□□□ 0.1
PCGF1Q9BSM1 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCGF1Q9BSM1 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCGF1Q9BSM1 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
PCGF1Q9BSM1 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
PCGF1Q9BSM1 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms