Protein–RNA interactions for Protein: Q99720

SIGMAR1, Sigma non-opioid intracellular receptor 1, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIGMAR1Q99720 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SIGMAR1Q99720 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SIGMAR1Q99720 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SIGMAR1Q99720 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SIGMAR1Q99720 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SIGMAR1Q99720 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
SIGMAR1Q99720 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
SIGMAR1Q99720 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SIGMAR1Q99720 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SIGMAR1Q99720 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
SIGMAR1Q99720 AL121761.2-201ENST00000598007 1648 ntBASIC12.55□□□□□ -0.4
SIGMAR1Q99720 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SIGMAR1Q99720 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SIGMAR1Q99720 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC12.54□□□□□ -0.4
SIGMAR1Q99720 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SIGMAR1Q99720 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
SIGMAR1Q99720 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SIGMAR1Q99720 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
SIGMAR1Q99720 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SIGMAR1Q99720 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SIGMAR1Q99720 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC12.54□□□□□ -0.4
SIGMAR1Q99720 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SIGMAR1Q99720 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SIGMAR1Q99720 LINC01529-204ENST00000636474 1715 ntBASIC12.54□□□□□ -0.4
SIGMAR1Q99720 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SIGMAR1Q99720 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SIGMAR1Q99720 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SIGMAR1Q99720 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
SIGMAR1Q99720 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC12.54□□□□□ -0.4
SIGMAR1Q99720 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SIGMAR1Q99720 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SIGMAR1Q99720 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC12.54□□□□□ -0.4
SIGMAR1Q99720 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SIGMAR1Q99720 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SIGMAR1Q99720 KRT18P60-201ENST00000312876 1297 ntBASIC12.54□□□□□ -0.4
SIGMAR1Q99720 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SIGMAR1Q99720 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SIGMAR1Q99720 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SIGMAR1Q99720 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC12.54□□□□□ -0.4
SIGMAR1Q99720 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SIGMAR1Q99720 AC009086.3-201ENST00000623486 1008 ntBASIC12.54□□□□□ -0.4
SIGMAR1Q99720 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
SIGMAR1Q99720 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
SIGMAR1Q99720 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC12.54□□□□□ -0.4
SIGMAR1Q99720 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SIGMAR1Q99720 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
SIGMAR1Q99720 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SIGMAR1Q99720 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SIGMAR1Q99720 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
SIGMAR1Q99720 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC12.54□□□□□ -0.4
SIGMAR1Q99720 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SIGMAR1Q99720 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SIGMAR1Q99720 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SIGMAR1Q99720 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SIGMAR1Q99720 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SIGMAR1Q99720 TP73-202ENST00000354437 2140 ntTSL 5 BASIC12.53□□□□□ -0.4
SIGMAR1Q99720 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SIGMAR1Q99720 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SIGMAR1Q99720 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC12.53□□□□□ -0.4
SIGMAR1Q99720 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SIGMAR1Q99720 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SIGMAR1Q99720 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SIGMAR1Q99720 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC12.53□□□□□ -0.4
SIGMAR1Q99720 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC12.53□□□□□ -0.4
SIGMAR1Q99720 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SIGMAR1Q99720 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SIGMAR1Q99720 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SIGMAR1Q99720 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SIGMAR1Q99720 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SIGMAR1Q99720 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
SIGMAR1Q99720 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC12.53□□□□□ -0.4
SIGMAR1Q99720 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SIGMAR1Q99720 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SIGMAR1Q99720 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC12.53□□□□□ -0.4
SIGMAR1Q99720 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SIGMAR1Q99720 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC12.53□□□□□ -0.4
SIGMAR1Q99720 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SIGMAR1Q99720 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
SIGMAR1Q99720 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
SIGMAR1Q99720 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
SIGMAR1Q99720 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
SIGMAR1Q99720 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
SIGMAR1Q99720 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SIGMAR1Q99720 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SIGMAR1Q99720 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC12.53□□□□□ -0.4
SIGMAR1Q99720 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SIGMAR1Q99720 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
SIGMAR1Q99720 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
SIGMAR1Q99720 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SIGMAR1Q99720 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
SIGMAR1Q99720 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
SIGMAR1Q99720 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
SIGMAR1Q99720 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SIGMAR1Q99720 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC12.52□□□□□ -0.4
SIGMAR1Q99720 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC12.52□□□□□ -0.4
SIGMAR1Q99720 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
SIGMAR1Q99720 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SIGMAR1Q99720 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SIGMAR1Q99720 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SIGMAR1Q99720 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms