Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CDK5RAP1Q96SZ6 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDK5RAP1Q96SZ6 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDK5RAP1Q96SZ6 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CDK5RAP1Q96SZ6 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDK5RAP1Q96SZ6 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDK5RAP1Q96SZ6 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.41■□□□□ 0.7
CDK5RAP1Q96SZ6 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDK5RAP1Q96SZ6 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDK5RAP1Q96SZ6 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDK5RAP1Q96SZ6 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDK5RAP1Q96SZ6 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CDK5RAP1Q96SZ6 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.41■□□□□ 0.7
CDK5RAP1Q96SZ6 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDK5RAP1Q96SZ6 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.41■□□□□ 0.7
CDK5RAP1Q96SZ6 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.41■□□□□ 0.7
CDK5RAP1Q96SZ6 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDK5RAP1Q96SZ6 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDK5RAP1Q96SZ6 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
CDK5RAP1Q96SZ6 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.41■□□□□ 0.7
CDK5RAP1Q96SZ6 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.41■□□□□ 0.7
CDK5RAP1Q96SZ6 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.41■□□□□ 0.7
CDK5RAP1Q96SZ6 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.41■□□□□ 0.7
CDK5RAP1Q96SZ6 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDK5RAP1Q96SZ6 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.41■□□□□ 0.7
CDK5RAP1Q96SZ6 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.4■□□□□ 0.7
CDK5RAP1Q96SZ6 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.4■□□□□ 0.7
CDK5RAP1Q96SZ6 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.4■□□□□ 0.7
CDK5RAP1Q96SZ6 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDK5RAP1Q96SZ6 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CDK5RAP1Q96SZ6 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDK5RAP1Q96SZ6 Z98044.1-201ENST00000632503 1764 ntBASIC19.4■□□□□ 0.7
CDK5RAP1Q96SZ6 AP000593.1-201ENST00000393668 712 ntBASIC19.4■□□□□ 0.7
CDK5RAP1Q96SZ6 AC112907.2-201ENST00000448639 330 ntBASIC19.4■□□□□ 0.7
CDK5RAP1Q96SZ6 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.4■□□□□ 0.7
CDK5RAP1Q96SZ6 KRT18P41-201ENST00000518924 1277 ntBASIC19.4■□□□□ 0.7
CDK5RAP1Q96SZ6 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.4■□□□□ 0.7
CDK5RAP1Q96SZ6 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.4■□□□□ 0.7
CDK5RAP1Q96SZ6 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.4■□□□□ 0.7
CDK5RAP1Q96SZ6 MIR3917-201ENST00000580971 93 ntBASIC19.4■□□□□ 0.7
CDK5RAP1Q96SZ6 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.4■□□□□ 0.7
CDK5RAP1Q96SZ6 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDK5RAP1Q96SZ6 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.4■□□□□ 0.7
CDK5RAP1Q96SZ6 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDK5RAP1Q96SZ6 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDK5RAP1Q96SZ6 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.4■□□□□ 0.7
CDK5RAP1Q96SZ6 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.4■□□□□ 0.7
CDK5RAP1Q96SZ6 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.4■□□□□ 0.7
CDK5RAP1Q96SZ6 AC006333.2-201ENST00000607957 2099 ntBASIC19.4■□□□□ 0.7
CDK5RAP1Q96SZ6 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDK5RAP1Q96SZ6 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDK5RAP1Q96SZ6 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDK5RAP1Q96SZ6 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDK5RAP1Q96SZ6 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDK5RAP1Q96SZ6 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CDK5RAP1Q96SZ6 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.39■□□□□ 0.7
CDK5RAP1Q96SZ6 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CDK5RAP1Q96SZ6 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CDK5RAP1Q96SZ6 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
CDK5RAP1Q96SZ6 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.39■□□□□ 0.7
CDK5RAP1Q96SZ6 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CDK5RAP1Q96SZ6 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CDK5RAP1Q96SZ6 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDK5RAP1Q96SZ6 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDK5RAP1Q96SZ6 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDK5RAP1Q96SZ6 SPDYE15P-201ENST00000424157 909 ntBASIC19.39■□□□□ 0.69
CDK5RAP1Q96SZ6 KRT18P38-201ENST00000449496 1282 ntBASIC19.39■□□□□ 0.69
CDK5RAP1Q96SZ6 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.39■□□□□ 0.69
CDK5RAP1Q96SZ6 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.39■□□□□ 0.69
CDK5RAP1Q96SZ6 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CDK5RAP1Q96SZ6 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.39■□□□□ 0.69
CDK5RAP1Q96SZ6 AC091076.1-201ENST00000610741 619 ntBASIC19.39■□□□□ 0.69
CDK5RAP1Q96SZ6 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDK5RAP1Q96SZ6 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.39■□□□□ 0.69
CDK5RAP1Q96SZ6 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CDK5RAP1Q96SZ6 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDK5RAP1Q96SZ6 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDK5RAP1Q96SZ6 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDK5RAP1Q96SZ6 AL357033.4-201ENST00000617703 1807 ntBASIC19.39■□□□□ 0.69
CDK5RAP1Q96SZ6 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDK5RAP1Q96SZ6 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CDK5RAP1Q96SZ6 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDK5RAP1Q96SZ6 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDK5RAP1Q96SZ6 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDK5RAP1Q96SZ6 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDK5RAP1Q96SZ6 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDK5RAP1Q96SZ6 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDK5RAP1Q96SZ6 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDK5RAP1Q96SZ6 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.38■□□□□ 0.69
CDK5RAP1Q96SZ6 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.38■□□□□ 0.69
CDK5RAP1Q96SZ6 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.38■□□□□ 0.69
CDK5RAP1Q96SZ6 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDK5RAP1Q96SZ6 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDK5RAP1Q96SZ6 MTMR9LP-203ENST00000426597 1545 ntBASIC19.38■□□□□ 0.69
CDK5RAP1Q96SZ6 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.38■□□□□ 0.69
CDK5RAP1Q96SZ6 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CDK5RAP1Q96SZ6 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDK5RAP1Q96SZ6 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.38■□□□□ 0.69
CDK5RAP1Q96SZ6 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.38■□□□□ 0.69
CDK5RAP1Q96SZ6 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms