Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC5.69□□□□□ -1.5
HMCN1Q96RW7 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
HMCN1Q96RW7 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HMCN1Q96RW7 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HMCN1Q96RW7 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HMCN1Q96RW7 SDCCAG3P1-201ENST00000589292 1150 ntBASIC5.69□□□□□ -1.5
HMCN1Q96RW7 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC5.69□□□□□ -1.5
HMCN1Q96RW7 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC5.69□□□□□ -1.5
HMCN1Q96RW7 GPR182-203ENST00000622922 591 ntBASIC5.69□□□□□ -1.5
HMCN1Q96RW7 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HMCN1Q96RW7 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
HMCN1Q96RW7 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HMCN1Q96RW7 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC5.69□□□□□ -1.5
HMCN1Q96RW7 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HMCN1Q96RW7 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC5.69□□□□□ -1.5
HMCN1Q96RW7 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HMCN1Q96RW7 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
HMCN1Q96RW7 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HMCN1Q96RW7 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC5.69□□□□□ -1.5
HMCN1Q96RW7 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC5.69□□□□□ -1.5
HMCN1Q96RW7 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HMCN1Q96RW7 AC011840.4-201ENST00000578471 627 ntBASIC5.69□□□□□ -1.5
HMCN1Q96RW7 MIR4538-201ENST00000581377 78 ntBASIC5.69□□□□□ -1.5
HMCN1Q96RW7 SPDYE22P-201ENST00000582158 798 ntBASIC5.69□□□□□ -1.5
HMCN1Q96RW7 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC5.69□□□□□ -1.5
HMCN1Q96RW7 CYGB-205ENST00000590175 830 ntTSL 3 BASIC5.69□□□□□ -1.5
HMCN1Q96RW7 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HMCN1Q96RW7 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC5.69□□□□□ -1.5
HMCN1Q96RW7 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC5.69□□□□□ -1.5
HMCN1Q96RW7 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HMCN1Q96RW7 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC5.69□□□□□ -1.5
HMCN1Q96RW7 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HMCN1Q96RW7 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC5.69□□□□□ -1.5
HMCN1Q96RW7 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HMCN1Q96RW7 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
HMCN1Q96RW7 AC005229.4-201ENST00000610085 2198 ntBASIC5.69□□□□□ -1.5
HMCN1Q96RW7 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HMCN1Q96RW7 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC5.69□□□□□ -1.5
HMCN1Q96RW7 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC5.69□□□□□ -1.5
HMCN1Q96RW7 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HMCN1Q96RW7 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HMCN1Q96RW7 FO538757.1-201ENST00000623083 1397 ntBASIC5.69□□□□□ -1.5
HMCN1Q96RW7 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HMCN1Q96RW7 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HMCN1Q96RW7 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC5.69□□□□□ -1.5
HMCN1Q96RW7 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HMCN1Q96RW7 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HMCN1Q96RW7 AC025678.2-201ENST00000562061 970 ntBASIC5.69□□□□□ -1.5
HMCN1Q96RW7 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC5.69□□□□□ -1.5
HMCN1Q96RW7 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC5.69□□□□□ -1.5
HMCN1Q96RW7 AC024563.2-201ENST00000603282 481 ntBASIC5.69□□□□□ -1.5
HMCN1Q96RW7 AC008735.5-201ENST00000623544 497 ntBASIC5.69□□□□□ -1.5
HMCN1Q96RW7 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC5.69□□□□□ -1.5
HMCN1Q96RW7 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
HMCN1Q96RW7 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC5.69□□□□□ -1.5
HMCN1Q96RW7 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC5.69□□□□□ -1.5
HMCN1Q96RW7 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
HMCN1Q96RW7 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
HMCN1Q96RW7 AC079776.1-201ENST00000401540 1152 ntBASIC5.68□□□□□ -1.5
HMCN1Q96RW7 ACTG1P14-201ENST00000446382 1122 ntBASIC5.68□□□□□ -1.5
HMCN1Q96RW7 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HMCN1Q96RW7 AP003733.1-201ENST00000491725 852 ntBASIC5.68□□□□□ -1.5
HMCN1Q96RW7 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
HMCN1Q96RW7 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
HMCN1Q96RW7 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HMCN1Q96RW7 AP002414.3-201ENST00000589352 1468 ntBASIC5.68□□□□□ -1.5
HMCN1Q96RW7 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HMCN1Q96RW7 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC5.68□□□□□ -1.5
HMCN1Q96RW7 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC5.68□□□□□ -1.5
HMCN1Q96RW7 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HMCN1Q96RW7 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HMCN1Q96RW7 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HMCN1Q96RW7 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC5.68□□□□□ -1.5
HMCN1Q96RW7 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC5.68□□□□□ -1.5
HMCN1Q96RW7 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC5.68□□□□□ -1.5
HMCN1Q96RW7 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC5.68□□□□□ -1.5
HMCN1Q96RW7 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HMCN1Q96RW7 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC5.68□□□□□ -1.5
HMCN1Q96RW7 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC5.68□□□□□ -1.5
HMCN1Q96RW7 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HMCN1Q96RW7 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HMCN1Q96RW7 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC5.68□□□□□ -1.5
HMCN1Q96RW7 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
HMCN1Q96RW7 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC5.68□□□□□ -1.5
HMCN1Q96RW7 AC004817.3-201ENST00000602957 2129 ntBASIC5.68□□□□□ -1.5
HMCN1Q96RW7 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
HMCN1Q96RW7 MRPS18AP1-201ENST00000414458 589 ntBASIC5.68□□□□□ -1.5
HMCN1Q96RW7 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC5.68□□□□□ -1.5
HMCN1Q96RW7 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC5.68□□□□□ -1.5
HMCN1Q96RW7 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC5.68□□□□□ -1.5
HMCN1Q96RW7 DAD1-205ENST00000543337 501 ntTSL 3 BASIC5.68□□□□□ -1.5
HMCN1Q96RW7 RHOQP1-201ENST00000555758 579 ntBASIC5.68□□□□□ -1.5
HMCN1Q96RW7 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
HMCN1Q96RW7 AC022145.2-201ENST00000598203 171 ntBASIC5.68□□□□□ -1.5
HMCN1Q96RW7 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC5.68□□□□□ -1.5
HMCN1Q96RW7 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC5.68□□□□□ -1.5
HMCN1Q96RW7 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HMCN1Q96RW7 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
HMCN1Q96RW7 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC5.68□□□□□ -1.5
HMCN1Q96RW7 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms