Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.33■□□□□ 0.53
CFAP54Q96N23 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.33■□□□□ 0.52
CFAP54Q96N23 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CFAP54Q96N23 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
CFAP54Q96N23 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CFAP54Q96N23 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CFAP54Q96N23 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CFAP54Q96N23 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CFAP54Q96N23 BEX3-201ENST00000361298 921 ntTSL 2 BASIC18.33■□□□□ 0.52
CFAP54Q96N23 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CFAP54Q96N23 PAWRP1-201ENST00000451083 565 ntBASIC18.33■□□□□ 0.52
CFAP54Q96N23 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
CFAP54Q96N23 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC18.33■□□□□ 0.52
CFAP54Q96N23 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CFAP54Q96N23 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.33■□□□□ 0.52
CFAP54Q96N23 AP001269.4-201ENST00000609611 512 ntBASIC18.33■□□□□ 0.52
CFAP54Q96N23 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.33■□□□□ 0.52
CFAP54Q96N23 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.33■□□□□ 0.52
CFAP54Q96N23 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.32■□□□□ 0.52
CFAP54Q96N23 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC18.32■□□□□ 0.52
CFAP54Q96N23 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.32■□□□□ 0.52
CFAP54Q96N23 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CFAP54Q96N23 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CFAP54Q96N23 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.32■□□□□ 0.52
CFAP54Q96N23 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CFAP54Q96N23 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CFAP54Q96N23 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CFAP54Q96N23 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CFAP54Q96N23 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.32■□□□□ 0.52
CFAP54Q96N23 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
CFAP54Q96N23 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.32■□□□□ 0.52
CFAP54Q96N23 AC096582.2-201ENST00000510860 516 ntBASIC18.32■□□□□ 0.52
CFAP54Q96N23 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC18.32■□□□□ 0.52
CFAP54Q96N23 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.32■□□□□ 0.52
CFAP54Q96N23 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
CFAP54Q96N23 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CFAP54Q96N23 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CFAP54Q96N23 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CFAP54Q96N23 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
CFAP54Q96N23 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.31■□□□□ 0.52
CFAP54Q96N23 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.31■□□□□ 0.52
CFAP54Q96N23 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CFAP54Q96N23 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CFAP54Q96N23 AC063926.2-201ENST00000623766 1308 ntBASIC18.31■□□□□ 0.52
CFAP54Q96N23 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.31■□□□□ 0.52
CFAP54Q96N23 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CFAP54Q96N23 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CFAP54Q96N23 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CFAP54Q96N23 VENTXP7-201ENST00000475503 772 ntBASIC18.31■□□□□ 0.52
CFAP54Q96N23 AP002472.1-201ENST00000577490 586 ntBASIC18.31■□□□□ 0.52
CFAP54Q96N23 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.31■□□□□ 0.52
CFAP54Q96N23 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CFAP54Q96N23 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CFAP54Q96N23 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CFAP54Q96N23 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC18.31■□□□□ 0.52
CFAP54Q96N23 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CFAP54Q96N23 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CFAP54Q96N23 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CFAP54Q96N23 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CFAP54Q96N23 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CFAP54Q96N23 AC005336.2-201ENST00000593183 939 ntBASIC18.31■□□□□ 0.52
CFAP54Q96N23 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC18.31■□□□□ 0.52
CFAP54Q96N23 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.31■□□□□ 0.52
CFAP54Q96N23 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CFAP54Q96N23 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CFAP54Q96N23 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CFAP54Q96N23 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CFAP54Q96N23 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CFAP54Q96N23 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CFAP54Q96N23 AC023274.1-201ENST00000418278 595 ntBASIC18.3■□□□□ 0.52
CFAP54Q96N23 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
CFAP54Q96N23 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC18.3■□□□□ 0.52
CFAP54Q96N23 AC009533.2-201ENST00000543664 586 ntBASIC18.3■□□□□ 0.52
CFAP54Q96N23 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC18.3■□□□□ 0.52
CFAP54Q96N23 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.3■□□□□ 0.52
CFAP54Q96N23 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CFAP54Q96N23 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CFAP54Q96N23 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CFAP54Q96N23 AC245100.3-201ENST00000441281 285 ntBASIC18.3■□□□□ 0.52
CFAP54Q96N23 RNA5SP415-201ENST00000517246 115 ntBASIC18.3■□□□□ 0.52
CFAP54Q96N23 CFL1-202ENST00000524553 860 ntTSL 2 BASIC18.3■□□□□ 0.52
CFAP54Q96N23 AC005332.3-201ENST00000589904 676 ntBASIC18.3■□□□□ 0.52
CFAP54Q96N23 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC18.3■□□□□ 0.52
CFAP54Q96N23 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CFAP54Q96N23 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CFAP54Q96N23 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CFAP54Q96N23 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CFAP54Q96N23 NUS1P2-201ENST00000417358 873 ntBASIC18.29■□□□□ 0.52
CFAP54Q96N23 AC132008.2-207ENST00000454517 770 ntBASIC18.29■□□□□ 0.52
CFAP54Q96N23 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.29■□□□□ 0.52
CFAP54Q96N23 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.29■□□□□ 0.52
CFAP54Q96N23 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CFAP54Q96N23 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CFAP54Q96N23 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CFAP54Q96N23 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CFAP54Q96N23 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
CFAP54Q96N23 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CFAP54Q96N23 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CFAP54Q96N23 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CFAP54Q96N23 KRT18P23-201ENST00000435622 1283 ntBASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms