Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ALPK3Q96L96 MIR5100-201ENST00000579544 119 ntBASIC20.37■□□□□ 0.85
ALPK3Q96L96 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ALPK3Q96L96 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
ALPK3Q96L96 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
ALPK3Q96L96 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ALPK3Q96L96 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ALPK3Q96L96 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
ALPK3Q96L96 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC20.37■□□□□ 0.85
ALPK3Q96L96 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
ALPK3Q96L96 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ALPK3Q96L96 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.37■□□□□ 0.85
ALPK3Q96L96 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ALPK3Q96L96 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ALPK3Q96L96 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ALPK3Q96L96 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ALPK3Q96L96 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC20.37■□□□□ 0.85
ALPK3Q96L96 PMP22-202ENST00000395936 816 ntTSL 3 BASIC20.37■□□□□ 0.85
ALPK3Q96L96 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC20.37■□□□□ 0.85
ALPK3Q96L96 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
ALPK3Q96L96 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC20.37■□□□□ 0.85
ALPK3Q96L96 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ALPK3Q96L96 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
ALPK3Q96L96 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ALPK3Q96L96 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ALPK3Q96L96 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
ALPK3Q96L96 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.36■□□□□ 0.85
ALPK3Q96L96 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
ALPK3Q96L96 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.36■□□□□ 0.85
ALPK3Q96L96 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.36■□□□□ 0.85
ALPK3Q96L96 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ALPK3Q96L96 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.36■□□□□ 0.85
ALPK3Q96L96 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ALPK3Q96L96 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
ALPK3Q96L96 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC20.36■□□□□ 0.85
ALPK3Q96L96 COA5-202ENST00000409997 557 ntTSL 4 BASIC20.36■□□□□ 0.85
ALPK3Q96L96 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC20.36■□□□□ 0.85
ALPK3Q96L96 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
ALPK3Q96L96 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC20.36■□□□□ 0.85
ALPK3Q96L96 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
ALPK3Q96L96 OR7E14P-202ENST00000530490 1290 ntBASIC20.36■□□□□ 0.85
ALPK3Q96L96 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
ALPK3Q96L96 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC20.36■□□□□ 0.85
ALPK3Q96L96 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC20.36■□□□□ 0.85
ALPK3Q96L96 AC008735.5-201ENST00000623544 497 ntBASIC20.36■□□□□ 0.85
ALPK3Q96L96 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
ALPK3Q96L96 AL109659.2-201ENST00000606809 1674 ntBASIC20.36■□□□□ 0.85
ALPK3Q96L96 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.36■□□□□ 0.85
ALPK3Q96L96 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
ALPK3Q96L96 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ALPK3Q96L96 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ALPK3Q96L96 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ALPK3Q96L96 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
ALPK3Q96L96 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ALPK3Q96L96 AC211486.1-202ENST00000416371 468 ntBASIC20.35■□□□□ 0.85
ALPK3Q96L96 AC211476.1-201ENST00000503899 468 ntBASIC20.35■□□□□ 0.85
ALPK3Q96L96 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC20.35■□□□□ 0.85
ALPK3Q96L96 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC20.35■□□□□ 0.85
ALPK3Q96L96 AC002347.1-201ENST00000569543 541 ntBASIC20.35■□□□□ 0.85
ALPK3Q96L96 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC20.35■□□□□ 0.85
ALPK3Q96L96 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC20.35■□□□□ 0.85
ALPK3Q96L96 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
ALPK3Q96L96 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.35■□□□□ 0.85
ALPK3Q96L96 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.35■□□□□ 0.85
ALPK3Q96L96 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ALPK3Q96L96 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC20.35■□□□□ 0.85
ALPK3Q96L96 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ALPK3Q96L96 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ALPK3Q96L96 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
ALPK3Q96L96 HTR5BP-201ENST00000430851 1154 ntBASIC20.35■□□□□ 0.85
ALPK3Q96L96 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC20.35■□□□□ 0.85
ALPK3Q96L96 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC20.35■□□□□ 0.85
ALPK3Q96L96 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC20.35■□□□□ 0.85
ALPK3Q96L96 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC20.35■□□□□ 0.85
ALPK3Q96L96 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC20.35■□□□□ 0.85
ALPK3Q96L96 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
ALPK3Q96L96 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ALPK3Q96L96 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
ALPK3Q96L96 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ALPK3Q96L96 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
ALPK3Q96L96 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ALPK3Q96L96 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
ALPK3Q96L96 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ALPK3Q96L96 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
ALPK3Q96L96 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC20.34■□□□□ 0.85
ALPK3Q96L96 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
ALPK3Q96L96 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ALPK3Q96L96 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
ALPK3Q96L96 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC20.34■□□□□ 0.85
ALPK3Q96L96 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC20.34■□□□□ 0.85
ALPK3Q96L96 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC20.34■□□□□ 0.85
ALPK3Q96L96 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC20.34■□□□□ 0.85
ALPK3Q96L96 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ALPK3Q96L96 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
ALPK3Q96L96 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.34■□□□□ 0.85
ALPK3Q96L96 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ALPK3Q96L96 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
ALPK3Q96L96 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ALPK3Q96L96 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ALPK3Q96L96 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms