Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC20.2■□□□□ 0.82
SNX27Q96L92 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.2■□□□□ 0.82
SNX27Q96L92 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
SNX27Q96L92 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SNX27Q96L92 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SNX27Q96L92 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SNX27Q96L92 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.2■□□□□ 0.82
SNX27Q96L92 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
SNX27Q96L92 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
SNX27Q96L92 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.19■□□□□ 0.82
SNX27Q96L92 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SNX27Q96L92 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20.19■□□□□ 0.82
SNX27Q96L92 KRT8P7-201ENST00000533003 1432 ntBASIC20.19■□□□□ 0.82
SNX27Q96L92 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SNX27Q96L92 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SNX27Q96L92 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SNX27Q96L92 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SNX27Q96L92 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SNX27Q96L92 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.19■□□□□ 0.82
SNX27Q96L92 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SNX27Q96L92 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
SNX27Q96L92 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SNX27Q96L92 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SNX27Q96L92 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SNX27Q96L92 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC20.19■□□□□ 0.82
SNX27Q96L92 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC20.19■□□□□ 0.82
SNX27Q96L92 FDX1P1-201ENST00000449115 551 ntBASIC20.19■□□□□ 0.82
SNX27Q96L92 CLEC4GP1-201ENST00000596555 870 ntBASIC20.19■□□□□ 0.82
SNX27Q96L92 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
SNX27Q96L92 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SNX27Q96L92 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SNX27Q96L92 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
SNX27Q96L92 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.19■□□□□ 0.82
SNX27Q96L92 AC034236.2-201ENST00000606662 1610 ntBASIC20.19■□□□□ 0.82
SNX27Q96L92 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
SNX27Q96L92 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
SNX27Q96L92 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.19■□□□□ 0.82
SNX27Q96L92 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
SNX27Q96L92 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SNX27Q96L92 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SNX27Q96L92 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SNX27Q96L92 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
SNX27Q96L92 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
SNX27Q96L92 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SNX27Q96L92 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SNX27Q96L92 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.18■□□□□ 0.82
SNX27Q96L92 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SNX27Q96L92 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SNX27Q96L92 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SNX27Q96L92 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC20.18■□□□□ 0.82
SNX27Q96L92 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC20.18■□□□□ 0.82
SNX27Q96L92 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SNX27Q96L92 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.18■□□□□ 0.82
SNX27Q96L92 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
SNX27Q96L92 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.18■□□□□ 0.82
SNX27Q96L92 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.18■□□□□ 0.82
SNX27Q96L92 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SNX27Q96L92 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SNX27Q96L92 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
SNX27Q96L92 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.17■□□□□ 0.82
SNX27Q96L92 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SNX27Q96L92 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
SNX27Q96L92 AC006333.2-201ENST00000607957 2099 ntBASIC20.17■□□□□ 0.82
SNX27Q96L92 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.17■□□□□ 0.82
SNX27Q96L92 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SNX27Q96L92 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SNX27Q96L92 Z98044.1-201ENST00000632503 1764 ntBASIC20.17■□□□□ 0.82
SNX27Q96L92 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SNX27Q96L92 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC20.17■□□□□ 0.82
SNX27Q96L92 FAM86EP-206ENST00000510506 987 ntBASIC20.17■□□□□ 0.82
SNX27Q96L92 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
SNX27Q96L92 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC20.17■□□□□ 0.82
SNX27Q96L92 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.17■□□□□ 0.82
SNX27Q96L92 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC20.17■□□□□ 0.82
SNX27Q96L92 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SNX27Q96L92 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
SNX27Q96L92 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SNX27Q96L92 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.17■□□□□ 0.82
SNX27Q96L92 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC20.17■□□□□ 0.82
SNX27Q96L92 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.17■□□□□ 0.82
SNX27Q96L92 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SNX27Q96L92 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.17■□□□□ 0.82
SNX27Q96L92 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SNX27Q96L92 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SNX27Q96L92 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
SNX27Q96L92 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
SNX27Q96L92 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.16■□□□□ 0.82
SNX27Q96L92 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SNX27Q96L92 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.16■□□□□ 0.82
SNX27Q96L92 AL357033.4-201ENST00000617703 1807 ntBASIC20.16■□□□□ 0.82
SNX27Q96L92 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SNX27Q96L92 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SNX27Q96L92 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SNX27Q96L92 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
SNX27Q96L92 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.16■□□□□ 0.82
SNX27Q96L92 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SNX27Q96L92 DAP-202ENST00000432074 1048 ntTSL 2 BASIC20.16■□□□□ 0.82
SNX27Q96L92 LY6E-213ENST00000522528 606 ntTSL 3 BASIC20.16■□□□□ 0.82
SNX27Q96L92 CD320-202ENST00000537716 1119 ntTSL 2 BASIC20.16■□□□□ 0.82
SNX27Q96L92 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms