Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CHAMP1Q96JM3 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CHAMP1Q96JM3 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CHAMP1Q96JM3 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CHAMP1Q96JM3 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CHAMP1Q96JM3 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CHAMP1Q96JM3 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC21.7■■□□□ 1.06
CHAMP1Q96JM3 POU5F1P3-201ENST00000428824 1078 ntBASIC21.7■■□□□ 1.06
CHAMP1Q96JM3 UNC93B5-201ENST00000530315 699 ntBASIC21.7■■□□□ 1.06
CHAMP1Q96JM3 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CHAMP1Q96JM3 AC142086.2-201ENST00000569753 217 ntBASIC21.7■■□□□ 1.06
CHAMP1Q96JM3 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC21.7■■□□□ 1.06
CHAMP1Q96JM3 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CHAMP1Q96JM3 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
CHAMP1Q96JM3 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CHAMP1Q96JM3 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CHAMP1Q96JM3 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC21.7■■□□□ 1.06
CHAMP1Q96JM3 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
CHAMP1Q96JM3 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CHAMP1Q96JM3 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CHAMP1Q96JM3 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CHAMP1Q96JM3 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CHAMP1Q96JM3 AC134043.2-201ENST00000624206 2238 ntBASIC21.7■■□□□ 1.06
CHAMP1Q96JM3 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CHAMP1Q96JM3 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CHAMP1Q96JM3 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CHAMP1Q96JM3 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC21.69■■□□□ 1.06
CHAMP1Q96JM3 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CHAMP1Q96JM3 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC21.69■■□□□ 1.06
CHAMP1Q96JM3 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CHAMP1Q96JM3 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CHAMP1Q96JM3 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CHAMP1Q96JM3 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC21.69■■□□□ 1.06
CHAMP1Q96JM3 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CHAMP1Q96JM3 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC21.69■■□□□ 1.06
CHAMP1Q96JM3 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CHAMP1Q96JM3 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CHAMP1Q96JM3 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC21.69■■□□□ 1.06
CHAMP1Q96JM3 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC21.69■■□□□ 1.06
CHAMP1Q96JM3 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC21.69■■□□□ 1.06
CHAMP1Q96JM3 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CHAMP1Q96JM3 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CHAMP1Q96JM3 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC21.69■■□□□ 1.06
CHAMP1Q96JM3 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC21.69■■□□□ 1.06
CHAMP1Q96JM3 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC21.69■■□□□ 1.06
CHAMP1Q96JM3 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CHAMP1Q96JM3 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CHAMP1Q96JM3 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CHAMP1Q96JM3 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC21.68■■□□□ 1.06
CHAMP1Q96JM3 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CHAMP1Q96JM3 AC099398.1-201ENST00000567919 2776 ntBASIC21.68■■□□□ 1.06
CHAMP1Q96JM3 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
CHAMP1Q96JM3 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC21.68■■□□□ 1.06
CHAMP1Q96JM3 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
CHAMP1Q96JM3 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.68■■□□□ 1.06
CHAMP1Q96JM3 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.68■■□□□ 1.06
CHAMP1Q96JM3 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC21.68■■□□□ 1.06
CHAMP1Q96JM3 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.68■■□□□ 1.06
CHAMP1Q96JM3 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CHAMP1Q96JM3 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.68■■□□□ 1.06
CHAMP1Q96JM3 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.68■■□□□ 1.06
CHAMP1Q96JM3 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC21.68■■□□□ 1.06
CHAMP1Q96JM3 MTDHP1-201ENST00000605323 784 ntBASIC21.68■■□□□ 1.06
CHAMP1Q96JM3 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CHAMP1Q96JM3 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC21.68■■□□□ 1.06
CHAMP1Q96JM3 AC133041.1-202ENST00000642053 222 ntBASIC21.68■■□□□ 1.06
CHAMP1Q96JM3 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CHAMP1Q96JM3 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CHAMP1Q96JM3 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC21.68■■□□□ 1.06
CHAMP1Q96JM3 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CHAMP1Q96JM3 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC21.68■■□□□ 1.06
CHAMP1Q96JM3 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
CHAMP1Q96JM3 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC21.68■■□□□ 1.06
CHAMP1Q96JM3 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CHAMP1Q96JM3 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHAMP1Q96JM3 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHAMP1Q96JM3 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CHAMP1Q96JM3 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHAMP1Q96JM3 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC21.67■■□□□ 1.06
CHAMP1Q96JM3 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
CHAMP1Q96JM3 AL357033.4-201ENST00000617703 1807 ntBASIC21.67■■□□□ 1.06
CHAMP1Q96JM3 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CHAMP1Q96JM3 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
CHAMP1Q96JM3 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHAMP1Q96JM3 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
CHAMP1Q96JM3 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CHAMP1Q96JM3 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHAMP1Q96JM3 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CHAMP1Q96JM3 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC21.67■■□□□ 1.06
CHAMP1Q96JM3 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC21.67■■□□□ 1.06
CHAMP1Q96JM3 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC21.67■■□□□ 1.06
CHAMP1Q96JM3 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC21.67■■□□□ 1.06
CHAMP1Q96JM3 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC21.67■■□□□ 1.06
CHAMP1Q96JM3 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CHAMP1Q96JM3 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC21.67■■□□□ 1.06
CHAMP1Q96JM3 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.67■■□□□ 1.06
CHAMP1Q96JM3 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHAMP1Q96JM3 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CHAMP1Q96JM3 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
CHAMP1Q96JM3 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms