Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM11Q96F44 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
TRIM11Q96F44 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM11Q96F44 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM11Q96F44 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM11Q96F44 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.8■□□□□ 0.76
TRIM11Q96F44 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.8■□□□□ 0.76
TRIM11Q96F44 RPS2P55-201ENST00000397318 883 ntBASIC19.8■□□□□ 0.76
TRIM11Q96F44 AC107956.1-201ENST00000494359 873 ntBASIC19.8■□□□□ 0.76
TRIM11Q96F44 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.8■□□□□ 0.76
TRIM11Q96F44 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.8■□□□□ 0.76
TRIM11Q96F44 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.8■□□□□ 0.76
TRIM11Q96F44 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM11Q96F44 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.8■□□□□ 0.76
TRIM11Q96F44 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
TRIM11Q96F44 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM11Q96F44 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM11Q96F44 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM11Q96F44 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM11Q96F44 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM11Q96F44 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM11Q96F44 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM11Q96F44 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM11Q96F44 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
TRIM11Q96F44 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM11Q96F44 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM11Q96F44 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.79■□□□□ 0.76
TRIM11Q96F44 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM11Q96F44 AL162741.1-201ENST00000565563 1558 ntBASIC19.79■□□□□ 0.76
TRIM11Q96F44 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM11Q96F44 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM11Q96F44 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM11Q96F44 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM11Q96F44 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
TRIM11Q96F44 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.79■□□□□ 0.76
TRIM11Q96F44 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
TRIM11Q96F44 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.79■□□□□ 0.76
TRIM11Q96F44 ABHD17AP1-201ENST00000358206 933 ntBASIC19.79■□□□□ 0.76
TRIM11Q96F44 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.79■□□□□ 0.76
TRIM11Q96F44 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM11Q96F44 AL158047.1-201ENST00000445918 881 ntBASIC19.79■□□□□ 0.76
TRIM11Q96F44 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.79■□□□□ 0.76
TRIM11Q96F44 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.79■□□□□ 0.76
TRIM11Q96F44 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.79■□□□□ 0.76
TRIM11Q96F44 AC233702.5-201ENST00000584107 538 ntBASIC19.79■□□□□ 0.76
TRIM11Q96F44 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.79■□□□□ 0.76
TRIM11Q96F44 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM11Q96F44 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM11Q96F44 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM11Q96F44 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
TRIM11Q96F44 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM11Q96F44 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM11Q96F44 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.79■□□□□ 0.76
TRIM11Q96F44 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM11Q96F44 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM11Q96F44 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM11Q96F44 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
TRIM11Q96F44 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM11Q96F44 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.78■□□□□ 0.76
TRIM11Q96F44 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM11Q96F44 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
TRIM11Q96F44 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.78■□□□□ 0.76
TRIM11Q96F44 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM11Q96F44 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM11Q96F44 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM11Q96F44 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM11Q96F44 MFAP1P1-201ENST00000442257 1255 ntBASIC19.78■□□□□ 0.76
TRIM11Q96F44 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM11Q96F44 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.78■□□□□ 0.76
TRIM11Q96F44 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
TRIM11Q96F44 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
TRIM11Q96F44 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM11Q96F44 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM11Q96F44 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM11Q96F44 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM11Q96F44 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.78■□□□□ 0.76
TRIM11Q96F44 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.77■□□□□ 0.76
TRIM11Q96F44 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM11Q96F44 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
TRIM11Q96F44 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.77■□□□□ 0.76
TRIM11Q96F44 CA15P1-201ENST00000481698 905 ntBASIC19.77■□□□□ 0.76
TRIM11Q96F44 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.77■□□□□ 0.76
TRIM11Q96F44 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.77■□□□□ 0.76
TRIM11Q96F44 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM11Q96F44 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM11Q96F44 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.77■□□□□ 0.76
TRIM11Q96F44 SLC25A1P4-201ENST00000567977 778 ntBASIC19.77■□□□□ 0.76
TRIM11Q96F44 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.77■□□□□ 0.76
TRIM11Q96F44 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM11Q96F44 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM11Q96F44 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
TRIM11Q96F44 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM11Q96F44 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM11Q96F44 AL390961.4-201ENST00000623958 2535 ntBASIC19.76■□□□□ 0.75
TRIM11Q96F44 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM11Q96F44 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM11Q96F44 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM11Q96F44 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM11Q96F44 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM11Q96F44 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms