Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC20.29■□□□□ 0.84
TRIM43Q96BQ3 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM43Q96BQ3 AL355877.3-201ENST00000622820 899 ntBASIC20.29■□□□□ 0.84
TRIM43Q96BQ3 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.29■□□□□ 0.84
TRIM43Q96BQ3 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC20.29■□□□□ 0.84
TRIM43Q96BQ3 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM43Q96BQ3 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM43Q96BQ3 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM43Q96BQ3 AC022898.2-201ENST00000616822 1312 ntBASIC20.28■□□□□ 0.84
TRIM43Q96BQ3 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM43Q96BQ3 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM43Q96BQ3 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
TRIM43Q96BQ3 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM43Q96BQ3 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM43Q96BQ3 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM43Q96BQ3 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM43Q96BQ3 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC20.28■□□□□ 0.84
TRIM43Q96BQ3 HIST2H3DP1-201ENST00000401004 416 ntBASIC20.28■□□□□ 0.84
TRIM43Q96BQ3 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC20.28■□□□□ 0.84
TRIM43Q96BQ3 FGFR3P6-201ENST00000457012 610 ntBASIC20.28■□□□□ 0.84
TRIM43Q96BQ3 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC20.28■□□□□ 0.84
TRIM43Q96BQ3 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC20.28■□□□□ 0.84
TRIM43Q96BQ3 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC20.28■□□□□ 0.84
TRIM43Q96BQ3 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM43Q96BQ3 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM43Q96BQ3 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
TRIM43Q96BQ3 KRT89P-201ENST00000620027 1478 ntBASIC20.28■□□□□ 0.84
TRIM43Q96BQ3 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM43Q96BQ3 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM43Q96BQ3 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM43Q96BQ3 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.27■□□□□ 0.84
TRIM43Q96BQ3 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM43Q96BQ3 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM43Q96BQ3 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
TRIM43Q96BQ3 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM43Q96BQ3 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM43Q96BQ3 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
TRIM43Q96BQ3 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM43Q96BQ3 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM43Q96BQ3 PMS2P2-201ENST00000425039 1128 ntBASIC20.27■□□□□ 0.84
TRIM43Q96BQ3 THAP5-204ENST00000438865 868 ntTSL 2 BASIC20.27■□□□□ 0.84
TRIM43Q96BQ3 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC20.27■□□□□ 0.84
TRIM43Q96BQ3 SCARNA2-201ENST00000458748 420 ntBASIC20.27■□□□□ 0.84
TRIM43Q96BQ3 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC20.27■□□□□ 0.84
TRIM43Q96BQ3 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
TRIM43Q96BQ3 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM43Q96BQ3 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM43Q96BQ3 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TRIM43Q96BQ3 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.27■□□□□ 0.83
TRIM43Q96BQ3 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
TRIM43Q96BQ3 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC20.27■□□□□ 0.83
TRIM43Q96BQ3 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC20.27■□□□□ 0.83
TRIM43Q96BQ3 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.27■□□□□ 0.83
TRIM43Q96BQ3 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM43Q96BQ3 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC20.26■□□□□ 0.83
TRIM43Q96BQ3 AC099778.1-201ENST00000568593 1911 ntBASIC20.26■□□□□ 0.83
TRIM43Q96BQ3 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
TRIM43Q96BQ3 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM43Q96BQ3 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM43Q96BQ3 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
TRIM43Q96BQ3 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM43Q96BQ3 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC20.26■□□□□ 0.83
TRIM43Q96BQ3 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM43Q96BQ3 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM43Q96BQ3 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
TRIM43Q96BQ3 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM43Q96BQ3 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM43Q96BQ3 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM43Q96BQ3 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM43Q96BQ3 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
TRIM43Q96BQ3 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM43Q96BQ3 KRT8P32-201ENST00000512863 1461 ntBASIC20.25■□□□□ 0.83
TRIM43Q96BQ3 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.25■□□□□ 0.83
TRIM43Q96BQ3 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM43Q96BQ3 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.25■□□□□ 0.83
TRIM43Q96BQ3 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.25■□□□□ 0.83
TRIM43Q96BQ3 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM43Q96BQ3 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
TRIM43Q96BQ3 RCN1P2-201ENST00000398357 915 ntBASIC20.25■□□□□ 0.83
TRIM43Q96BQ3 UPF3AP3-201ENST00000420996 769 ntBASIC20.25■□□□□ 0.83
TRIM43Q96BQ3 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
TRIM43Q96BQ3 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC20.25■□□□□ 0.83
TRIM43Q96BQ3 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC20.25■□□□□ 0.83
TRIM43Q96BQ3 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC20.25■□□□□ 0.83
TRIM43Q96BQ3 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC20.25■□□□□ 0.83
TRIM43Q96BQ3 AC027796.2-201ENST00000575326 344 ntBASIC20.25■□□□□ 0.83
TRIM43Q96BQ3 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM43Q96BQ3 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
TRIM43Q96BQ3 CAND2-206ENST00000626378 333 ntTSL 5 BASIC20.25■□□□□ 0.83
TRIM43Q96BQ3 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.25■□□□□ 0.83
TRIM43Q96BQ3 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.25■□□□□ 0.83
TRIM43Q96BQ3 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM43Q96BQ3 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM43Q96BQ3 AC104109.2-201ENST00000602919 1418 ntBASIC20.25■□□□□ 0.83
TRIM43Q96BQ3 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM43Q96BQ3 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.25■□□□□ 0.83
TRIM43Q96BQ3 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM43Q96BQ3 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.25■□□□□ 0.83
TRIM43Q96BQ3 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC20.25■□□□□ 0.83
TRIM43Q96BQ3 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms