Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.01■□□□□ 0.47
VPS33AQ96AX1 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.01■□□□□ 0.47
VPS33AQ96AX1 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.01■□□□□ 0.47
VPS33AQ96AX1 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.01■□□□□ 0.47
VPS33AQ96AX1 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VPS33AQ96AX1 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VPS33AQ96AX1 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
VPS33AQ96AX1 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.01■□□□□ 0.47
VPS33AQ96AX1 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
VPS33AQ96AX1 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.01■□□□□ 0.47
VPS33AQ96AX1 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VPS33AQ96AX1 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VPS33AQ96AX1 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VPS33AQ96AX1 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18■□□□□ 0.47
VPS33AQ96AX1 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VPS33AQ96AX1 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
VPS33AQ96AX1 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18■□□□□ 0.47
VPS33AQ96AX1 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
VPS33AQ96AX1 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VPS33AQ96AX1 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18■□□□□ 0.47
VPS33AQ96AX1 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VPS33AQ96AX1 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18■□□□□ 0.47
VPS33AQ96AX1 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
VPS33AQ96AX1 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VPS33AQ96AX1 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
VPS33AQ96AX1 UNC93B4-201ENST00000505679 747 ntBASIC18■□□□□ 0.47
VPS33AQ96AX1 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18■□□□□ 0.47
VPS33AQ96AX1 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
VPS33AQ96AX1 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
VPS33AQ96AX1 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VPS33AQ96AX1 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VPS33AQ96AX1 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VPS33AQ96AX1 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18■□□□□ 0.47
VPS33AQ96AX1 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18■□□□□ 0.47
VPS33AQ96AX1 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VPS33AQ96AX1 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
VPS33AQ96AX1 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
VPS33AQ96AX1 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.99■□□□□ 0.47
VPS33AQ96AX1 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.99■□□□□ 0.47
VPS33AQ96AX1 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
VPS33AQ96AX1 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
VPS33AQ96AX1 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.99■□□□□ 0.47
VPS33AQ96AX1 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.99■□□□□ 0.47
VPS33AQ96AX1 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
VPS33AQ96AX1 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
VPS33AQ96AX1 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
VPS33AQ96AX1 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
VPS33AQ96AX1 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.99■□□□□ 0.47
VPS33AQ96AX1 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.99■□□□□ 0.47
VPS33AQ96AX1 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
VPS33AQ96AX1 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.99■□□□□ 0.47
VPS33AQ96AX1 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.99■□□□□ 0.47
VPS33AQ96AX1 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.99■□□□□ 0.47
VPS33AQ96AX1 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.99■□□□□ 0.47
VPS33AQ96AX1 C1QL1P1-201ENST00000568105 661 ntBASIC17.99■□□□□ 0.47
VPS33AQ96AX1 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
VPS33AQ96AX1 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
VPS33AQ96AX1 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.99■□□□□ 0.47
VPS33AQ96AX1 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
VPS33AQ96AX1 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
VPS33AQ96AX1 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
VPS33AQ96AX1 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
VPS33AQ96AX1 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
VPS33AQ96AX1 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.99■□□□□ 0.47
VPS33AQ96AX1 NBPF21P-201ENST00000425093 1451 ntBASIC17.99■□□□□ 0.47
VPS33AQ96AX1 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
VPS33AQ96AX1 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
VPS33AQ96AX1 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
VPS33AQ96AX1 HEIH-201ENST00000623091 1652 ntBASIC17.99■□□□□ 0.47
VPS33AQ96AX1 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
VPS33AQ96AX1 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
VPS33AQ96AX1 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.99■□□□□ 0.47
VPS33AQ96AX1 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.99■□□□□ 0.47
VPS33AQ96AX1 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.99■□□□□ 0.47
VPS33AQ96AX1 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
VPS33AQ96AX1 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
VPS33AQ96AX1 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
VPS33AQ96AX1 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.98■□□□□ 0.47
VPS33AQ96AX1 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
VPS33AQ96AX1 KRT8P41-201ENST00000533985 1514 ntBASIC17.98■□□□□ 0.47
VPS33AQ96AX1 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
VPS33AQ96AX1 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
VPS33AQ96AX1 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.98■□□□□ 0.47
VPS33AQ96AX1 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
VPS33AQ96AX1 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
VPS33AQ96AX1 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.98■□□□□ 0.47
VPS33AQ96AX1 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.98■□□□□ 0.47
VPS33AQ96AX1 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.98■□□□□ 0.47
VPS33AQ96AX1 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.98■□□□□ 0.47
VPS33AQ96AX1 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.98■□□□□ 0.47
VPS33AQ96AX1 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
VPS33AQ96AX1 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.98■□□□□ 0.47
VPS33AQ96AX1 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
VPS33AQ96AX1 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
VPS33AQ96AX1 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
VPS33AQ96AX1 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
VPS33AQ96AX1 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.98■□□□□ 0.47
VPS33AQ96AX1 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
VPS33AQ96AX1 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.98■□□□□ 0.47
VPS33AQ96AX1 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms