Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RPS4Y2Q8TD47 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RPS4Y2Q8TD47 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
RPS4Y2Q8TD47 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
RPS4Y2Q8TD47 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RPS4Y2Q8TD47 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
RPS4Y2Q8TD47 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC16.39■□□□□ 0.21
RPS4Y2Q8TD47 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.39■□□□□ 0.21
RPS4Y2Q8TD47 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RPS4Y2Q8TD47 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.39■□□□□ 0.21
RPS4Y2Q8TD47 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
RPS4Y2Q8TD47 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RPS4Y2Q8TD47 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.39■□□□□ 0.21
RPS4Y2Q8TD47 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RPS4Y2Q8TD47 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RPS4Y2Q8TD47 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
RPS4Y2Q8TD47 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.39■□□□□ 0.21
RPS4Y2Q8TD47 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.39■□□□□ 0.21
RPS4Y2Q8TD47 RNA5SP413-201ENST00000516373 109 ntBASIC16.39■□□□□ 0.21
RPS4Y2Q8TD47 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RPS4Y2Q8TD47 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC16.39■□□□□ 0.21
RPS4Y2Q8TD47 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RPS4Y2Q8TD47 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC16.39■□□□□ 0.21
RPS4Y2Q8TD47 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
RPS4Y2Q8TD47 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.39■□□□□ 0.21
RPS4Y2Q8TD47 AL357033.4-201ENST00000617703 1807 ntBASIC16.39■□□□□ 0.21
RPS4Y2Q8TD47 GNAS-203ENST00000306120 1878 ntBASIC16.39■□□□□ 0.21
RPS4Y2Q8TD47 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.39■□□□□ 0.21
RPS4Y2Q8TD47 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RPS4Y2Q8TD47 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
RPS4Y2Q8TD47 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RPS4Y2Q8TD47 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RPS4Y2Q8TD47 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.39■□□□□ 0.21
RPS4Y2Q8TD47 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RPS4Y2Q8TD47 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RPS4Y2Q8TD47 AC138028.4-201ENST00000564984 1845 ntBASIC16.38■□□□□ 0.21
RPS4Y2Q8TD47 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.38■□□□□ 0.21
RPS4Y2Q8TD47 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
RPS4Y2Q8TD47 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.38■□□□□ 0.21
RPS4Y2Q8TD47 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.38■□□□□ 0.21
RPS4Y2Q8TD47 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RPS4Y2Q8TD47 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RPS4Y2Q8TD47 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC16.38■□□□□ 0.21
RPS4Y2Q8TD47 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RPS4Y2Q8TD47 PRSS44-201ENST00000515154 1146 ntBASIC16.38■□□□□ 0.21
RPS4Y2Q8TD47 KRT18P41-201ENST00000518924 1277 ntBASIC16.38■□□□□ 0.21
RPS4Y2Q8TD47 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC16.38■□□□□ 0.21
RPS4Y2Q8TD47 PRKY-204ENST00000533551 1019 ntBASIC16.38■□□□□ 0.21
RPS4Y2Q8TD47 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RPS4Y2Q8TD47 LINC00896-202ENST00000609602 2128 ntBASIC16.38■□□□□ 0.21
RPS4Y2Q8TD47 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC16.38■□□□□ 0.21
RPS4Y2Q8TD47 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.38■□□□□ 0.21
RPS4Y2Q8TD47 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RPS4Y2Q8TD47 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
RPS4Y2Q8TD47 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.38■□□□□ 0.21
RPS4Y2Q8TD47 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
RPS4Y2Q8TD47 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.37■□□□□ 0.21
RPS4Y2Q8TD47 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RPS4Y2Q8TD47 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RPS4Y2Q8TD47 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RPS4Y2Q8TD47 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RPS4Y2Q8TD47 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RPS4Y2Q8TD47 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RPS4Y2Q8TD47 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RPS4Y2Q8TD47 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RPS4Y2Q8TD47 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.37■□□□□ 0.21
RPS4Y2Q8TD47 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.37■□□□□ 0.21
RPS4Y2Q8TD47 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
RPS4Y2Q8TD47 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
RPS4Y2Q8TD47 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
RPS4Y2Q8TD47 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
RPS4Y2Q8TD47 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RPS4Y2Q8TD47 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC16.37■□□□□ 0.21
RPS4Y2Q8TD47 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RPS4Y2Q8TD47 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16.37■□□□□ 0.21
RPS4Y2Q8TD47 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC16.37■□□□□ 0.21
RPS4Y2Q8TD47 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
RPS4Y2Q8TD47 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC16.37■□□□□ 0.21
RPS4Y2Q8TD47 AC004264.1-201ENST00000608354 794 ntBASIC16.37■□□□□ 0.21
RPS4Y2Q8TD47 INO80E-214ENST00000620599 515 ntTSL 2 BASIC16.37■□□□□ 0.21
RPS4Y2Q8TD47 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RPS4Y2Q8TD47 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RPS4Y2Q8TD47 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.37■□□□□ 0.21
RPS4Y2Q8TD47 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
RPS4Y2Q8TD47 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RPS4Y2Q8TD47 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
RPS4Y2Q8TD47 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
RPS4Y2Q8TD47 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RPS4Y2Q8TD47 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.37■□□□□ 0.21
RPS4Y2Q8TD47 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.37■□□□□ 0.21
RPS4Y2Q8TD47 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RPS4Y2Q8TD47 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC16.37■□□□□ 0.21
RPS4Y2Q8TD47 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.37■□□□□ 0.21
RPS4Y2Q8TD47 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RPS4Y2Q8TD47 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RPS4Y2Q8TD47 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RPS4Y2Q8TD47 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
RPS4Y2Q8TD47 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
RPS4Y2Q8TD47 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.36■□□□□ 0.21
RPS4Y2Q8TD47 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms