Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBA3Q8TBC4 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBA3Q8TBC4 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBA3Q8TBC4 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
UBA3Q8TBC4 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBA3Q8TBC4 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBA3Q8TBC4 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBA3Q8TBC4 AC093525.10-201ENST00000625130 1569 ntBASIC19.79■□□□□ 0.76
UBA3Q8TBC4 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBA3Q8TBC4 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
UBA3Q8TBC4 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
UBA3Q8TBC4 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
UBA3Q8TBC4 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.79■□□□□ 0.76
UBA3Q8TBC4 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBA3Q8TBC4 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBA3Q8TBC4 MIR564-202ENST00000385049 94 ntBASIC19.79■□□□□ 0.76
UBA3Q8TBC4 AC005521.1-201ENST00000393351 872 ntBASIC19.79■□□□□ 0.76
UBA3Q8TBC4 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.79■□□□□ 0.76
UBA3Q8TBC4 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
UBA3Q8TBC4 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBA3Q8TBC4 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBA3Q8TBC4 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.79■□□□□ 0.76
UBA3Q8TBC4 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBA3Q8TBC4 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
UBA3Q8TBC4 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBA3Q8TBC4 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBA3Q8TBC4 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
UBA3Q8TBC4 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.79■□□□□ 0.76
UBA3Q8TBC4 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.79■□□□□ 0.76
UBA3Q8TBC4 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBA3Q8TBC4 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.79■□□□□ 0.76
UBA3Q8TBC4 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBA3Q8TBC4 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
UBA3Q8TBC4 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.79■□□□□ 0.76
UBA3Q8TBC4 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.78■□□□□ 0.76
UBA3Q8TBC4 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
UBA3Q8TBC4 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.78■□□□□ 0.76
UBA3Q8TBC4 AL499627.1-201ENST00000569373 2188 ntBASIC19.78■□□□□ 0.76
UBA3Q8TBC4 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.78■□□□□ 0.76
UBA3Q8TBC4 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
UBA3Q8TBC4 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
UBA3Q8TBC4 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.78■□□□□ 0.76
UBA3Q8TBC4 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
UBA3Q8TBC4 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
UBA3Q8TBC4 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
UBA3Q8TBC4 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
UBA3Q8TBC4 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
UBA3Q8TBC4 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.78■□□□□ 0.76
UBA3Q8TBC4 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
UBA3Q8TBC4 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
UBA3Q8TBC4 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.78■□□□□ 0.76
UBA3Q8TBC4 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.78■□□□□ 0.76
UBA3Q8TBC4 ANO7L1-203ENST00000602586 1720 ntBASIC19.78■□□□□ 0.76
UBA3Q8TBC4 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
UBA3Q8TBC4 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
UBA3Q8TBC4 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
UBA3Q8TBC4 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
UBA3Q8TBC4 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
UBA3Q8TBC4 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
UBA3Q8TBC4 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
UBA3Q8TBC4 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.77■□□□□ 0.76
UBA3Q8TBC4 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
UBA3Q8TBC4 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.77■□□□□ 0.76
UBA3Q8TBC4 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
UBA3Q8TBC4 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
UBA3Q8TBC4 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
UBA3Q8TBC4 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
UBA3Q8TBC4 TERF1P1-201ENST00000311003 1181 ntBASIC19.77■□□□□ 0.76
UBA3Q8TBC4 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
UBA3Q8TBC4 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
UBA3Q8TBC4 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.77■□□□□ 0.76
UBA3Q8TBC4 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
UBA3Q8TBC4 AC113347.1-201ENST00000413321 391 ntBASIC19.77■□□□□ 0.76
UBA3Q8TBC4 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.77■□□□□ 0.76
UBA3Q8TBC4 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
UBA3Q8TBC4 LIN28AP1-201ENST00000429574 405 ntBASIC19.77■□□□□ 0.76
UBA3Q8TBC4 AL137013.1-201ENST00000432946 1228 ntBASIC19.77■□□□□ 0.76
UBA3Q8TBC4 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.77■□□□□ 0.76
UBA3Q8TBC4 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.77■□□□□ 0.76
UBA3Q8TBC4 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.77■□□□□ 0.76
UBA3Q8TBC4 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.77■□□□□ 0.76
UBA3Q8TBC4 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.77■□□□□ 0.76
UBA3Q8TBC4 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
UBA3Q8TBC4 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.77■□□□□ 0.76
UBA3Q8TBC4 Z98044.1-201ENST00000632503 1764 ntBASIC19.77■□□□□ 0.76
UBA3Q8TBC4 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
UBA3Q8TBC4 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.77■□□□□ 0.75
UBA3Q8TBC4 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
UBA3Q8TBC4 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
UBA3Q8TBC4 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBA3Q8TBC4 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.76■□□□□ 0.75
UBA3Q8TBC4 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.76■□□□□ 0.75
UBA3Q8TBC4 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBA3Q8TBC4 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
UBA3Q8TBC4 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBA3Q8TBC4 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
UBA3Q8TBC4 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.76■□□□□ 0.75
UBA3Q8TBC4 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
UBA3Q8TBC4 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
UBA3Q8TBC4 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms