Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SHKBP1Q8TBC3 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
SHKBP1Q8TBC3 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.65■□□□□ 0.74
SHKBP1Q8TBC3 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SHKBP1Q8TBC3 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SHKBP1Q8TBC3 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.65■□□□□ 0.74
SHKBP1Q8TBC3 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.65■□□□□ 0.74
SHKBP1Q8TBC3 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SHKBP1Q8TBC3 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SHKBP1Q8TBC3 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.64■□□□□ 0.74
SHKBP1Q8TBC3 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
SHKBP1Q8TBC3 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SHKBP1Q8TBC3 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
SHKBP1Q8TBC3 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.64■□□□□ 0.73
SHKBP1Q8TBC3 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.64■□□□□ 0.73
SHKBP1Q8TBC3 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SHKBP1Q8TBC3 AL645929.1-201ENST00000420084 975 ntBASIC19.64■□□□□ 0.73
SHKBP1Q8TBC3 SEC1P-202ENST00000473944 940 ntBASIC19.64■□□□□ 0.73
SHKBP1Q8TBC3 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.64■□□□□ 0.73
SHKBP1Q8TBC3 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SHKBP1Q8TBC3 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC19.64■□□□□ 0.73
SHKBP1Q8TBC3 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.64■□□□□ 0.73
SHKBP1Q8TBC3 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.64■□□□□ 0.73
SHKBP1Q8TBC3 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SHKBP1Q8TBC3 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SHKBP1Q8TBC3 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.64■□□□□ 0.73
SHKBP1Q8TBC3 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SHKBP1Q8TBC3 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SHKBP1Q8TBC3 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
SHKBP1Q8TBC3 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.64■□□□□ 0.73
SHKBP1Q8TBC3 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SHKBP1Q8TBC3 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.64■□□□□ 0.73
SHKBP1Q8TBC3 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SHKBP1Q8TBC3 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SHKBP1Q8TBC3 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SHKBP1Q8TBC3 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SHKBP1Q8TBC3 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.63■□□□□ 0.73
SHKBP1Q8TBC3 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SHKBP1Q8TBC3 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SHKBP1Q8TBC3 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.63■□□□□ 0.73
SHKBP1Q8TBC3 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SHKBP1Q8TBC3 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SHKBP1Q8TBC3 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
SHKBP1Q8TBC3 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SHKBP1Q8TBC3 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.63■□□□□ 0.73
SHKBP1Q8TBC3 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SHKBP1Q8TBC3 TEX21P-204ENST00000641479 1693 ntBASIC19.63■□□□□ 0.73
SHKBP1Q8TBC3 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.63■□□□□ 0.73
SHKBP1Q8TBC3 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SHKBP1Q8TBC3 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SHKBP1Q8TBC3 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
SHKBP1Q8TBC3 ATP5G2P1-201ENST00000433580 426 ntBASIC19.63■□□□□ 0.73
SHKBP1Q8TBC3 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
SHKBP1Q8TBC3 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.63■□□□□ 0.73
SHKBP1Q8TBC3 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.63■□□□□ 0.73
SHKBP1Q8TBC3 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SHKBP1Q8TBC3 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SHKBP1Q8TBC3 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SHKBP1Q8TBC3 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SHKBP1Q8TBC3 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SHKBP1Q8TBC3 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SHKBP1Q8TBC3 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SHKBP1Q8TBC3 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.62■□□□□ 0.73
SHKBP1Q8TBC3 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SHKBP1Q8TBC3 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SHKBP1Q8TBC3 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
SHKBP1Q8TBC3 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SHKBP1Q8TBC3 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SHKBP1Q8TBC3 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.62■□□□□ 0.73
SHKBP1Q8TBC3 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.62■□□□□ 0.73
SHKBP1Q8TBC3 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC19.62■□□□□ 0.73
SHKBP1Q8TBC3 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.62■□□□□ 0.73
SHKBP1Q8TBC3 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC19.62■□□□□ 0.73
SHKBP1Q8TBC3 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.62■□□□□ 0.73
SHKBP1Q8TBC3 BCL10-202ENST00000620248 774 ntTSL 5 BASIC19.62■□□□□ 0.73
SHKBP1Q8TBC3 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SHKBP1Q8TBC3 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SHKBP1Q8TBC3 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SHKBP1Q8TBC3 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SHKBP1Q8TBC3 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SHKBP1Q8TBC3 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
SHKBP1Q8TBC3 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
SHKBP1Q8TBC3 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SHKBP1Q8TBC3 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SHKBP1Q8TBC3 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.61■□□□□ 0.73
SHKBP1Q8TBC3 NEFHP1-201ENST00000412845 2629 ntBASIC19.61■□□□□ 0.73
SHKBP1Q8TBC3 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
SHKBP1Q8TBC3 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SHKBP1Q8TBC3 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.61■□□□□ 0.73
SHKBP1Q8TBC3 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SHKBP1Q8TBC3 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SHKBP1Q8TBC3 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.61■□□□□ 0.73
SHKBP1Q8TBC3 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SHKBP1Q8TBC3 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.61■□□□□ 0.73
SHKBP1Q8TBC3 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.61■□□□□ 0.73
SHKBP1Q8TBC3 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SHKBP1Q8TBC3 NPAP1P7-201ENST00000613027 823 ntBASIC19.61■□□□□ 0.73
SHKBP1Q8TBC3 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.61■□□□□ 0.73
SHKBP1Q8TBC3 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SHKBP1Q8TBC3 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms