Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
NKX2-3Q8TAU0 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
NKX2-3Q8TAU0 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC22.15■■□□□ 1.14
NKX2-3Q8TAU0 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC22.15■■□□□ 1.14
NKX2-3Q8TAU0 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.14
NKX2-3Q8TAU0 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
NKX2-3Q8TAU0 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
NKX2-3Q8TAU0 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
NKX2-3Q8TAU0 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
NKX2-3Q8TAU0 Telomerase-vert.1-201ENST00000363312 438 ntBASIC22.14■■□□□ 1.13
NKX2-3Q8TAU0 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
NKX2-3Q8TAU0 KLK8-205ENST00000593490 267 ntTSL 3 BASIC22.14■■□□□ 1.13
NKX2-3Q8TAU0 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
NKX2-3Q8TAU0 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
NKX2-3Q8TAU0 AC099343.3-201ENST00000605834 2503 ntBASIC22.14■■□□□ 1.13
NKX2-3Q8TAU0 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
NKX2-3Q8TAU0 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
NKX2-3Q8TAU0 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC22.14■■□□□ 1.13
NKX2-3Q8TAU0 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
NKX2-3Q8TAU0 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC22.14■■□□□ 1.13
NKX2-3Q8TAU0 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC22.14■■□□□ 1.13
NKX2-3Q8TAU0 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
NKX2-3Q8TAU0 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
NKX2-3Q8TAU0 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC22.13■■□□□ 1.13
NKX2-3Q8TAU0 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC22.13■■□□□ 1.13
NKX2-3Q8TAU0 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
NKX2-3Q8TAU0 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
NKX2-3Q8TAU0 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
NKX2-3Q8TAU0 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC22.13■■□□□ 1.13
NKX2-3Q8TAU0 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
NKX2-3Q8TAU0 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
NKX2-3Q8TAU0 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC22.13■■□□□ 1.13
NKX2-3Q8TAU0 TNXA-203ENST00000507684 2038 ntBASIC22.13■■□□□ 1.13
NKX2-3Q8TAU0 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
NKX2-3Q8TAU0 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
NKX2-3Q8TAU0 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
NKX2-3Q8TAU0 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
NKX2-3Q8TAU0 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
NKX2-3Q8TAU0 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
NKX2-3Q8TAU0 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
NKX2-3Q8TAU0 PTK2-216ENST00000519881 863 ntTSL 3 BASIC22.13■■□□□ 1.13
NKX2-3Q8TAU0 VENTXP5-201ENST00000523979 775 ntBASIC22.13■■□□□ 1.13
NKX2-3Q8TAU0 CD81-212ENST00000526072 1172 ntTSL 5 BASIC22.13■■□□□ 1.13
NKX2-3Q8TAU0 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC22.13■■□□□ 1.13
NKX2-3Q8TAU0 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
NKX2-3Q8TAU0 AL357033.4-201ENST00000617703 1807 ntBASIC22.13■■□□□ 1.13
NKX2-3Q8TAU0 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
NKX2-3Q8TAU0 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC22.12■■□□□ 1.13
NKX2-3Q8TAU0 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
NKX2-3Q8TAU0 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
NKX2-3Q8TAU0 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
NKX2-3Q8TAU0 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
NKX2-3Q8TAU0 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
NKX2-3Q8TAU0 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
NKX2-3Q8TAU0 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
NKX2-3Q8TAU0 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC22.12■■□□□ 1.13
NKX2-3Q8TAU0 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
NKX2-3Q8TAU0 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC22.12■■□□□ 1.13
NKX2-3Q8TAU0 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
NKX2-3Q8TAU0 AC004408.2-201ENST00000623613 2777 ntBASIC22.12■■□□□ 1.13
NKX2-3Q8TAU0 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC22.12■■□□□ 1.13
NKX2-3Q8TAU0 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
NKX2-3Q8TAU0 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
NKX2-3Q8TAU0 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
NKX2-3Q8TAU0 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
NKX2-3Q8TAU0 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC22.11■■□□□ 1.13
NKX2-3Q8TAU0 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
NKX2-3Q8TAU0 AL109659.2-201ENST00000606809 1674 ntBASIC22.11■■□□□ 1.13
NKX2-3Q8TAU0 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
NKX2-3Q8TAU0 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC22.11■■□□□ 1.13
NKX2-3Q8TAU0 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
NKX2-3Q8TAU0 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC22.11■■□□□ 1.13
NKX2-3Q8TAU0 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
NKX2-3Q8TAU0 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
NKX2-3Q8TAU0 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC22.11■■□□□ 1.13
NKX2-3Q8TAU0 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC22.11■■□□□ 1.13
NKX2-3Q8TAU0 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC22.11■■□□□ 1.13
NKX2-3Q8TAU0 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
NKX2-3Q8TAU0 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC22.11■■□□□ 1.13
NKX2-3Q8TAU0 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
NKX2-3Q8TAU0 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
NKX2-3Q8TAU0 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
NKX2-3Q8TAU0 AL023973.1-201ENST00000624619 620 ntBASIC22.11■■□□□ 1.13
NKX2-3Q8TAU0 AC083906.6-201ENST00000641366 219 ntBASIC22.11■■□□□ 1.13
NKX2-3Q8TAU0 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
NKX2-3Q8TAU0 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC22.11■■□□□ 1.13
NKX2-3Q8TAU0 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC22.11■■□□□ 1.13
NKX2-3Q8TAU0 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
NKX2-3Q8TAU0 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
NKX2-3Q8TAU0 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC22.11■■□□□ 1.13
NKX2-3Q8TAU0 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
NKX2-3Q8TAU0 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC22.11■■□□□ 1.13
NKX2-3Q8TAU0 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC22.11■■□□□ 1.13
NKX2-3Q8TAU0 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC22.1■■□□□ 1.13
NKX2-3Q8TAU0 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
NKX2-3Q8TAU0 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
NKX2-3Q8TAU0 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
NKX2-3Q8TAU0 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
NKX2-3Q8TAU0 AC246785.2-201ENST00000432512 513 ntBASIC22.1■■□□□ 1.13
NKX2-3Q8TAU0 ATP5G2P1-201ENST00000433580 426 ntBASIC22.1■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms