Protein–RNA interactions for Protein: Q8TA94

ZNF563, Zinc finger protein 563, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF563Q8TA94 SNORA78-201ENST00000459373 127 ntBASIC17.22■□□□□ 0.35
ZNF563Q8TA94 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.22■□□□□ 0.35
ZNF563Q8TA94 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.22■□□□□ 0.35
ZNF563Q8TA94 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.22■□□□□ 0.35
ZNF563Q8TA94 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.22■□□□□ 0.35
ZNF563Q8TA94 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.22■□□□□ 0.35
ZNF563Q8TA94 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF563Q8TA94 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF563Q8TA94 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF563Q8TA94 AC083906.6-201ENST00000641366 219 ntBASIC17.22■□□□□ 0.35
ZNF563Q8TA94 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF563Q8TA94 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF563Q8TA94 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF563Q8TA94 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF563Q8TA94 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
ZNF563Q8TA94 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.21■□□□□ 0.35
ZNF563Q8TA94 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZNF563Q8TA94 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
ZNF563Q8TA94 CROCCP3-202ENST00000420820 1947 ntBASIC17.21■□□□□ 0.35
ZNF563Q8TA94 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
ZNF563Q8TA94 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.21■□□□□ 0.35
ZNF563Q8TA94 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ZNF563Q8TA94 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZNF563Q8TA94 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
ZNF563Q8TA94 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
ZNF563Q8TA94 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ZNF563Q8TA94 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ZNF563Q8TA94 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.21■□□□□ 0.35
ZNF563Q8TA94 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.21■□□□□ 0.35
ZNF563Q8TA94 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZNF563Q8TA94 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
ZNF563Q8TA94 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ZNF563Q8TA94 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.21■□□□□ 0.35
ZNF563Q8TA94 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.21■□□□□ 0.35
ZNF563Q8TA94 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.21■□□□□ 0.35
ZNF563Q8TA94 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZNF563Q8TA94 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZNF563Q8TA94 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.21■□□□□ 0.35
ZNF563Q8TA94 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZNF563Q8TA94 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZNF563Q8TA94 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZNF563Q8TA94 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
ZNF563Q8TA94 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
ZNF563Q8TA94 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.21■□□□□ 0.35
ZNF563Q8TA94 KRT17P2-201ENST00000300992 1314 ntBASIC17.21■□□□□ 0.34
ZNF563Q8TA94 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ZNF563Q8TA94 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
ZNF563Q8TA94 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ZNF563Q8TA94 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
ZNF563Q8TA94 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
ZNF563Q8TA94 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.2■□□□□ 0.34
ZNF563Q8TA94 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
ZNF563Q8TA94 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
ZNF563Q8TA94 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ZNF563Q8TA94 UNC93B2-201ENST00000285383 730 ntBASIC17.2■□□□□ 0.34
ZNF563Q8TA94 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ZNF563Q8TA94 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
ZNF563Q8TA94 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.2■□□□□ 0.34
ZNF563Q8TA94 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ZNF563Q8TA94 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.2■□□□□ 0.34
ZNF563Q8TA94 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
ZNF563Q8TA94 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.2■□□□□ 0.34
ZNF563Q8TA94 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ZNF563Q8TA94 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
ZNF563Q8TA94 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
ZNF563Q8TA94 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
ZNF563Q8TA94 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.2■□□□□ 0.34
ZNF563Q8TA94 KRT8P3-201ENST00000519669 1449 ntBASIC17.2■□□□□ 0.34
ZNF563Q8TA94 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.2■□□□□ 0.34
ZNF563Q8TA94 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ZNF563Q8TA94 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.2■□□□□ 0.34
ZNF563Q8TA94 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
ZNF563Q8TA94 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ZNF563Q8TA94 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
ZNF563Q8TA94 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
ZNF563Q8TA94 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
ZNF563Q8TA94 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ZNF563Q8TA94 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
ZNF563Q8TA94 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
ZNF563Q8TA94 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
ZNF563Q8TA94 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ZNF563Q8TA94 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ZNF563Q8TA94 AC096733.2-201ENST00000609937 1394 ntBASIC17.19■□□□□ 0.34
ZNF563Q8TA94 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.19■□□□□ 0.34
ZNF563Q8TA94 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ZNF563Q8TA94 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.19■□□□□ 0.34
ZNF563Q8TA94 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.19■□□□□ 0.34
ZNF563Q8TA94 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.19■□□□□ 0.34
ZNF563Q8TA94 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ZNF563Q8TA94 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.19■□□□□ 0.34
ZNF563Q8TA94 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
ZNF563Q8TA94 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ZNF563Q8TA94 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ZNF563Q8TA94 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ZNF563Q8TA94 Z98044.1-201ENST00000632503 1764 ntBASIC17.19■□□□□ 0.34
ZNF563Q8TA94 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ZNF563Q8TA94 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
ZNF563Q8TA94 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.19■□□□□ 0.34
ZNF563Q8TA94 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ZNF563Q8TA94 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms