Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC148Q8NFR7 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC21.55■■□□□ 1.04
CCDC148Q8NFR7 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC21.55■■□□□ 1.04
CCDC148Q8NFR7 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC148Q8NFR7 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC21.55■■□□□ 1.04
CCDC148Q8NFR7 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC148Q8NFR7 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC148Q8NFR7 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC148Q8NFR7 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC21.55■■□□□ 1.04
CCDC148Q8NFR7 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC148Q8NFR7 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
CCDC148Q8NFR7 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC21.55■■□□□ 1.04
CCDC148Q8NFR7 DUT-205ENST00000558813 769 ntTSL 2 BASIC21.55■■□□□ 1.04
CCDC148Q8NFR7 WWOX-216ENST00000569818 525 ntBASIC21.55■■□□□ 1.04
CCDC148Q8NFR7 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
CCDC148Q8NFR7 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC148Q8NFR7 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
CCDC148Q8NFR7 NFYC-AS1-201ENST00000606277 1687 ntBASIC21.55■■□□□ 1.04
CCDC148Q8NFR7 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
CCDC148Q8NFR7 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC148Q8NFR7 CROCCP3-202ENST00000420820 1947 ntBASIC21.55■■□□□ 1.04
CCDC148Q8NFR7 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
CCDC148Q8NFR7 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC21.55■■□□□ 1.04
CCDC148Q8NFR7 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC21.55■■□□□ 1.04
CCDC148Q8NFR7 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC148Q8NFR7 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC148Q8NFR7 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC148Q8NFR7 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC21.54■■□□□ 1.04
CCDC148Q8NFR7 AC036111.1-201ENST00000533973 1582 ntBASIC21.54■■□□□ 1.04
CCDC148Q8NFR7 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC148Q8NFR7 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC148Q8NFR7 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
CCDC148Q8NFR7 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC148Q8NFR7 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC148Q8NFR7 AC211429.1-201ENST00000415277 523 ntBASIC21.54■■□□□ 1.04
CCDC148Q8NFR7 SLC25A3P1-201ENST00000443844 931 ntBASIC21.54■■□□□ 1.04
CCDC148Q8NFR7 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC21.54■■□□□ 1.04
CCDC148Q8NFR7 CR769767.2-201ENST00000622735 460 ntBASIC21.54■■□□□ 1.04
CCDC148Q8NFR7 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC21.54■■□□□ 1.04
CCDC148Q8NFR7 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC148Q8NFR7 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
CCDC148Q8NFR7 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC148Q8NFR7 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC148Q8NFR7 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
CCDC148Q8NFR7 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CCDC148Q8NFR7 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC148Q8NFR7 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC21.53■■□□□ 1.04
CCDC148Q8NFR7 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC21.53■■□□□ 1.04
CCDC148Q8NFR7 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC21.53■■□□□ 1.04
CCDC148Q8NFR7 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC148Q8NFR7 COBL-210ENST00000632460 1941 ntTSL 5 BASIC21.53■■□□□ 1.04
CCDC148Q8NFR7 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC21.53■■□□□ 1.04
CCDC148Q8NFR7 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC21.53■■□□□ 1.04
CCDC148Q8NFR7 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC148Q8NFR7 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC21.53■■□□□ 1.04
CCDC148Q8NFR7 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC148Q8NFR7 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC148Q8NFR7 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC21.53■■□□□ 1.04
CCDC148Q8NFR7 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC21.53■■□□□ 1.04
CCDC148Q8NFR7 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC148Q8NFR7 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC148Q8NFR7 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC148Q8NFR7 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
CCDC148Q8NFR7 Z98044.1-201ENST00000632503 1764 ntBASIC21.53■■□□□ 1.04
CCDC148Q8NFR7 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
CCDC148Q8NFR7 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC21.53■■□□□ 1.04
CCDC148Q8NFR7 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC21.53■■□□□ 1.04
CCDC148Q8NFR7 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC148Q8NFR7 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC148Q8NFR7 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC21.52■■□□□ 1.04
CCDC148Q8NFR7 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC21.52■■□□□ 1.04
CCDC148Q8NFR7 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC148Q8NFR7 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC21.52■■□□□ 1.04
CCDC148Q8NFR7 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC21.52■■□□□ 1.04
CCDC148Q8NFR7 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC148Q8NFR7 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC21.52■■□□□ 1.04
CCDC148Q8NFR7 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
CCDC148Q8NFR7 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC21.52■■□□□ 1.04
CCDC148Q8NFR7 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC21.52■■□□□ 1.03
CCDC148Q8NFR7 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.03
CCDC148Q8NFR7 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC148Q8NFR7 AL031598.1-201ENST00000561511 1773 ntBASIC21.51■■□□□ 1.03
CCDC148Q8NFR7 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
CCDC148Q8NFR7 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC148Q8NFR7 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC148Q8NFR7 AL357033.4-201ENST00000617703 1807 ntBASIC21.51■■□□□ 1.03
CCDC148Q8NFR7 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC21.51■■□□□ 1.03
CCDC148Q8NFR7 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC148Q8NFR7 ILF2-202ENST00000368681 726 ntTSL 2 BASIC21.51■■□□□ 1.03
CCDC148Q8NFR7 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC21.51■■□□□ 1.03
CCDC148Q8NFR7 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC21.51■■□□□ 1.03
CCDC148Q8NFR7 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC21.51■■□□□ 1.03
CCDC148Q8NFR7 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC21.51■■□□□ 1.03
CCDC148Q8NFR7 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
CCDC148Q8NFR7 AC005363.2-201ENST00000618631 242 ntBASIC21.51■■□□□ 1.03
CCDC148Q8NFR7 KRT8P45-201ENST00000414328 1447 ntBASIC21.51■■□□□ 1.03
CCDC148Q8NFR7 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC21.51■■□□□ 1.03
CCDC148Q8NFR7 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC148Q8NFR7 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC148Q8NFR7 SNAI3-AS1-205ENST00000568633 2096 ntBASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms