Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SRFBP1Q8NEF9 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SRFBP1Q8NEF9 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SRFBP1Q8NEF9 AC090340.1-201ENST00000620778 4980 ntBASIC17.86■□□□□ 0.45
SRFBP1Q8NEF9 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SRFBP1Q8NEF9 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SRFBP1Q8NEF9 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.86■□□□□ 0.45
SRFBP1Q8NEF9 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SRFBP1Q8NEF9 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
SRFBP1Q8NEF9 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.86■□□□□ 0.45
SRFBP1Q8NEF9 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.86■□□□□ 0.45
SRFBP1Q8NEF9 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.86■□□□□ 0.45
SRFBP1Q8NEF9 MYC-208ENST00000641036 567 ntBASIC17.86■□□□□ 0.45
SRFBP1Q8NEF9 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
SRFBP1Q8NEF9 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SRFBP1Q8NEF9 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.86■□□□□ 0.45
SRFBP1Q8NEF9 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.86■□□□□ 0.45
SRFBP1Q8NEF9 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SRFBP1Q8NEF9 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
SRFBP1Q8NEF9 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
SRFBP1Q8NEF9 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.86■□□□□ 0.45
SRFBP1Q8NEF9 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SRFBP1Q8NEF9 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SRFBP1Q8NEF9 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SRFBP1Q8NEF9 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SRFBP1Q8NEF9 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
SRFBP1Q8NEF9 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SRFBP1Q8NEF9 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SRFBP1Q8NEF9 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SRFBP1Q8NEF9 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
SRFBP1Q8NEF9 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SRFBP1Q8NEF9 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
SRFBP1Q8NEF9 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.85■□□□□ 0.45
SRFBP1Q8NEF9 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.85■□□□□ 0.45
SRFBP1Q8NEF9 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SRFBP1Q8NEF9 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SRFBP1Q8NEF9 AL023284.2-201ENST00000405850 579 ntBASIC17.85■□□□□ 0.45
SRFBP1Q8NEF9 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SRFBP1Q8NEF9 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SRFBP1Q8NEF9 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SRFBP1Q8NEF9 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.85■□□□□ 0.45
SRFBP1Q8NEF9 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SRFBP1Q8NEF9 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SRFBP1Q8NEF9 AC008622.2-201ENST00000617006 1229 ntBASIC17.85■□□□□ 0.45
SRFBP1Q8NEF9 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SRFBP1Q8NEF9 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.84■□□□□ 0.45
SRFBP1Q8NEF9 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SRFBP1Q8NEF9 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SRFBP1Q8NEF9 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
SRFBP1Q8NEF9 AC092338.2-201ENST00000568827 1415 ntBASIC17.84■□□□□ 0.45
SRFBP1Q8NEF9 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SRFBP1Q8NEF9 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.84■□□□□ 0.45
SRFBP1Q8NEF9 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.84■□□□□ 0.45
SRFBP1Q8NEF9 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SRFBP1Q8NEF9 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.84■□□□□ 0.45
SRFBP1Q8NEF9 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.84■□□□□ 0.45
SRFBP1Q8NEF9 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.84■□□□□ 0.45
SRFBP1Q8NEF9 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SRFBP1Q8NEF9 AC093503.3-201ENST00000624917 2352 ntBASIC17.84■□□□□ 0.45
SRFBP1Q8NEF9 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SRFBP1Q8NEF9 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
SRFBP1Q8NEF9 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SRFBP1Q8NEF9 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
SRFBP1Q8NEF9 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SRFBP1Q8NEF9 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SRFBP1Q8NEF9 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SRFBP1Q8NEF9 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
SRFBP1Q8NEF9 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SRFBP1Q8NEF9 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
SRFBP1Q8NEF9 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
SRFBP1Q8NEF9 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
SRFBP1Q8NEF9 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SRFBP1Q8NEF9 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SRFBP1Q8NEF9 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SRFBP1Q8NEF9 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
SRFBP1Q8NEF9 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
SRFBP1Q8NEF9 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.83■□□□□ 0.44
SRFBP1Q8NEF9 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SRFBP1Q8NEF9 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SRFBP1Q8NEF9 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.83■□□□□ 0.44
SRFBP1Q8NEF9 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.83■□□□□ 0.44
SRFBP1Q8NEF9 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
SRFBP1Q8NEF9 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.83■□□□□ 0.44
SRFBP1Q8NEF9 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.83■□□□□ 0.44
SRFBP1Q8NEF9 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.83■□□□□ 0.44
SRFBP1Q8NEF9 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SRFBP1Q8NEF9 AL512604.3-201ENST00000569583 964 ntBASIC17.83■□□□□ 0.44
SRFBP1Q8NEF9 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.83■□□□□ 0.44
SRFBP1Q8NEF9 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SRFBP1Q8NEF9 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.83■□□□□ 0.44
SRFBP1Q8NEF9 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.83■□□□□ 0.44
SRFBP1Q8NEF9 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SRFBP1Q8NEF9 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.83■□□□□ 0.44
SRFBP1Q8NEF9 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SRFBP1Q8NEF9 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.83■□□□□ 0.44
SRFBP1Q8NEF9 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.83■□□□□ 0.44
SRFBP1Q8NEF9 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SRFBP1Q8NEF9 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SRFBP1Q8NEF9 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.83■□□□□ 0.44
SRFBP1Q8NEF9 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms